RNA–Protein interactions for RNA: ENST00000546953.1

WDR27-212, Transcript of WD repeat domain 27, humanhuman

TSL 2

Gene WDR27, Length 3,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR27-212ENST00000546953 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
WDR27-212ENST00000546953 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.48
WDR27-212ENST00000546953 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
WDR27-212ENST00000546953 PPARGC1BQ86YN6 1023 aaKnown RBP17.73■□□□□ 0.43
WDR27-212ENST00000546953 HRCP23327 699 aa17.66■□□□□ 0.42
WDR27-212ENST00000546953 PCGF6Q9BYE7 350 aa17.63■□□□□ 0.41
WDR27-212ENST00000546953 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
WDR27-212ENST00000546953 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
WDR27-212ENST00000546953 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
WDR27-212ENST00000546953 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
WDR27-212ENST00000546953 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
WDR27-212ENST00000546953 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.29
WDR27-212ENST00000546953 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
WDR27-212ENST00000546953 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
WDR27-212ENST00000546953 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
WDR27-212ENST00000546953 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
WDR27-212ENST00000546953 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.24
WDR27-212ENST00000546953 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
WDR27-212ENST00000546953 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
WDR27-212ENST00000546953 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
WDR27-212ENST00000546953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
WDR27-212ENST00000546953 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
WDR27-212ENST00000546953 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
WDR27-212ENST00000546953 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
WDR27-212ENST00000546953 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
WDR27-212ENST00000546953 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
WDR27-212ENST00000546953 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
WDR27-212ENST00000546953 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
WDR27-212ENST00000546953 CENPBP07199 599 aaPredicted RBP15.99■□□□□ 0.15
WDR27-212ENST00000546953 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
WDR27-212ENST00000546953 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
WDR27-212ENST00000546953 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
WDR27-212ENST00000546953 ABCC9O60706 1549 aa15.85■□□□□ 0.13
WDR27-212ENST00000546953 MIER1Q8N108 512 aa15.83■□□□□ 0.12
WDR27-212ENST00000546953 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
WDR27-212ENST00000546953 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
WDR27-212ENST00000546953 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
WDR27-212ENST00000546953 MYT1Q01538 1121 aa15.68■□□□□ 0.1
WDR27-212ENST00000546953 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
WDR27-212ENST00000546953 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
WDR27-212ENST00000546953 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
WDR27-212ENST00000546953 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
WDR27-212ENST00000546953 WIZO95785 1651 aa15.54■□□□□ 0.08
WDR27-212ENST00000546953 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
WDR27-212ENST00000546953 SOGA1O94964 1423 aa15.51■□□□□ 0.07
WDR27-212ENST00000546953 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
WDR27-212ENST00000546953 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
WDR27-212ENST00000546953 BCANQ96GW7 911 aa15.47■□□□□ 0.07
WDR27-212ENST00000546953 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
WDR27-212ENST00000546953 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
WDR27-212ENST00000546953 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
WDR27-212ENST00000546953 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
WDR27-212ENST00000546953 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
WDR27-212ENST00000546953 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
WDR27-212ENST00000546953 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
WDR27-212ENST00000546953 ITGAEP38570 1179 aa15.25■□□□□ 0.03
WDR27-212ENST00000546953 ANP32EQ9BTT0 268 aa15.25■□□□□ 0.03
WDR27-212ENST00000546953 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
WDR27-212ENST00000546953 APLP2Q06481 763 aa15.22■□□□□ 0.03
WDR27-212ENST00000546953 FKBP8Q14318 412 aa15.17■□□□□ 0.02
WDR27-212ENST00000546953 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
WDR27-212ENST00000546953 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
WDR27-212ENST00000546953 CLIP1P30622 1438 aa15.13■□□□□ 0.01
WDR27-212ENST00000546953 GOLGA3Q08378 1498 aa15.12■□□□□ 0.01
WDR27-212ENST00000546953 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
WDR27-212ENST00000546953 NACADO15069 1562 aa15.09■□□□□ 0.01
WDR27-212ENST00000546953 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
WDR27-212ENST00000546953 TRIM52Q96A61 297 aa15.08■□□□□ 0
WDR27-212ENST00000546953 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
WDR27-212ENST00000546953 SMARCA2P51531 1590 aa15.05■□□□□ 0
WDR27-212ENST00000546953 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
WDR27-212ENST00000546953 RAPGEF2Q9Y4G8 1499 aa15.02□□□□□ -0.01
WDR27-212ENST00000546953 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
WDR27-212ENST00000546953 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
WDR27-212ENST00000546953 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
WDR27-212ENST00000546953 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
WDR27-212ENST00000546953 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
WDR27-212ENST00000546953 MSH5O43196 834 aa14.95□□□□□ -0.02
WDR27-212ENST00000546953 EEA1Q15075 1411 aa14.94□□□□□ -0.02
WDR27-212ENST00000546953 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
WDR27-212ENST00000546953 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
WDR27-212ENST00000546953 KIF21BO75037 1637 aa14.91□□□□□ -0.02
WDR27-212ENST00000546953 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
WDR27-212ENST00000546953 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
WDR27-212ENST00000546953 NEFLP07196 543 aa14.87□□□□□ -0.03
WDR27-212ENST00000546953 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
WDR27-212ENST00000546953 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
WDR27-212ENST00000546953 RAB3GAP2Q9H2M9 1393 aa14.79□□□□□ -0.04
WDR27-212ENST00000546953 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
WDR27-212ENST00000546953 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
WDR27-212ENST00000546953 SENP3-EIF4A1A0A087X0R7 540 aa14.75□□□□□ -0.05
WDR27-212ENST00000546953 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
WDR27-212ENST00000546953 CCNB3Q8WWL7 1395 aa14.74□□□□□ -0.05
WDR27-212ENST00000546953 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
WDR27-212ENST00000546953 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
WDR27-212ENST00000546953 ANP32CO43423 234 aa14.71□□□□□ -0.05
WDR27-212ENST00000546953 CNGB1Q14028 1251 aaPredicted RBP14.71□□□□□ -0.05
WDR27-212ENST00000546953 HNRNPUQ00839 825 aaKnown RBP eCLIP14.71□□□□□ -0.05
WDR27-212ENST00000546953 MAPKBP1O60336 1514 aa14.7□□□□□ -0.06
WDR27-212ENST00000546953 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms