RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
DDX47-212ENST00000545038 HRCP23327 699 aa13.52□□□□□ -0.25
DDX47-212ENST00000545038 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
DDX47-212ENST00000545038 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
DDX47-212ENST00000545038 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
DDX47-212ENST00000545038 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
DDX47-212ENST00000545038 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
DDX47-212ENST00000545038 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
DDX47-212ENST00000545038 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
DDX47-212ENST00000545038 DCAF1Q9Y4B6 1507 aa12.97□□□□□ -0.33
DDX47-212ENST00000545038 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
DDX47-212ENST00000545038 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
DDX47-212ENST00000545038 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
DDX47-212ENST00000545038 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
DDX47-212ENST00000545038 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
DDX47-212ENST00000545038 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
DDX47-212ENST00000545038 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
DDX47-212ENST00000545038 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
DDX47-212ENST00000545038 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
DDX47-212ENST00000545038 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
DDX47-212ENST00000545038 ABCC9O60706 1549 aa12.37□□□□□ -0.43
DDX47-212ENST00000545038 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
DDX47-212ENST00000545038 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
DDX47-212ENST00000545038 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
DDX47-212ENST00000545038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
DDX47-212ENST00000545038 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
DDX47-212ENST00000545038 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
DDX47-212ENST00000545038 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
DDX47-212ENST00000545038 MYT1Q01538 1121 aa12.23□□□□□ -0.45
DDX47-212ENST00000545038 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
DDX47-212ENST00000545038 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
DDX47-212ENST00000545038 SCRIBQ14160 1630 aa12.13□□□□□ -0.47
DDX47-212ENST00000545038 TTBK1Q5TCY1 1321 aaPredicted RBP12.04□□□□□ -0.48
DDX47-212ENST00000545038 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
DDX47-212ENST00000545038 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
DDX47-212ENST00000545038 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
DDX47-212ENST00000545038 MIER1Q8N108 512 aa11.98□□□□□ -0.49
DDX47-212ENST00000545038 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
DDX47-212ENST00000545038 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
DDX47-212ENST00000545038 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
DDX47-212ENST00000545038 WIZO95785 1651 aa11.96□□□□□ -0.5
DDX47-212ENST00000545038 CEP162Q5TB80 1403 aa11.91□□□□□ -0.5
DDX47-212ENST00000545038 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
DDX47-212ENST00000545038 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
DDX47-212ENST00000545038 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
DDX47-212ENST00000545038 SOGA1O94964 1423 aa11.82□□□□□ -0.52
DDX47-212ENST00000545038 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
DDX47-212ENST00000545038 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
DDX47-212ENST00000545038 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
DDX47-212ENST00000545038 NACADO15069 1562 aa11.77□□□□□ -0.53
DDX47-212ENST00000545038 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
DDX47-212ENST00000545038 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
DDX47-212ENST00000545038 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
DDX47-212ENST00000545038 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
DDX47-212ENST00000545038 ANP32EQ9BTT0 268 aa11.67□□□□□ -0.54
DDX47-212ENST00000545038 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
DDX47-212ENST00000545038 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
DDX47-212ENST00000545038 GOLGA3Q08378 1498 aa11.65□□□□□ -0.54
DDX47-212ENST00000545038 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
DDX47-212ENST00000545038 EEA1Q15075 1411 aa11.63□□□□□ -0.55
DDX47-212ENST00000545038 CLSPNQ9HAW4 1339 aa11.62□□□□□ -0.55
DDX47-212ENST00000545038 CLIP1P30622 1438 aa11.6□□□□□ -0.55
DDX47-212ENST00000545038 KCNH8Q96L42 1107 aa11.59□□□□□ -0.55
DDX47-212ENST00000545038 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
DDX47-212ENST00000545038 VPS8Q8N3P4 1428 aa11.57□□□□□ -0.56
DDX47-212ENST00000545038 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
DDX47-212ENST00000545038 KIF21BO75037 1637 aa11.55□□□□□ -0.56
DDX47-212ENST00000545038 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
DDX47-212ENST00000545038 BCANQ96GW7 911 aa11.51□□□□□ -0.57
DDX47-212ENST00000545038 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
DDX47-212ENST00000545038 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
DDX47-212ENST00000545038 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
DDX47-212ENST00000545038 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
DDX47-212ENST00000545038 FKBP8Q14318 412 aa11.43□□□□□ -0.58
DDX47-212ENST00000545038 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
DDX47-212ENST00000545038 APLP2Q06481 763 aa11.43□□□□□ -0.58
DDX47-212ENST00000545038 RBM19Q9Y4C8 960 aaKnown RBP11.43□□□□□ -0.58
DDX47-212ENST00000545038 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.59
DDX47-212ENST00000545038 MSH5O43196 834 aa11.39□□□□□ -0.59
DDX47-212ENST00000545038 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
DDX47-212ENST00000545038 CUX2O14529 1486 aa11.38□□□□□ -0.59
DDX47-212ENST00000545038 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
DDX47-212ENST00000545038 MAPKBP1O60336 1514 aa11.37□□□□□ -0.59
DDX47-212ENST00000545038 ITGAEP38570 1179 aa11.36□□□□□ -0.59
DDX47-212ENST00000545038 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
DDX47-212ENST00000545038 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
DDX47-212ENST00000545038 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
DDX47-212ENST00000545038 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
DDX47-212ENST00000545038 CCNB3Q8WWL7 1395 aa11.29□□□□□ -0.6
DDX47-212ENST00000545038 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
DDX47-212ENST00000545038 PRXQ9BXM0 1461 aa11.28□□□□□ -0.6
DDX47-212ENST00000545038 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.6
DDX47-212ENST00000545038 HIRIP3Q9BW71 556 aaPredicted RBP11.27□□□□□ -0.61
DDX47-212ENST00000545038 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
DDX47-212ENST00000545038 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
DDX47-212ENST00000545038 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
DDX47-212ENST00000545038 NEFLP07196 543 aa11.23□□□□□ -0.61
DDX47-212ENST00000545038 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.62
DDX47-212ENST00000545038 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
DDX47-212ENST00000545038 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms