RNA–Protein interactions for RNA: ENST00000544019.5

AP000943.2-201, humanhuman

TSL 5 BASIC

Gene AP000943.2, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.2-201ENST00000544019 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
AP000943.2-201ENST00000544019 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
AP000943.2-201ENST00000544019 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
AP000943.2-201ENST00000544019 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
AP000943.2-201ENST00000544019 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
AP000943.2-201ENST00000544019 FOXD1Q16676 465 aa21.2■□□□□ 0.98
AP000943.2-201ENST00000544019 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
AP000943.2-201ENST00000544019 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
AP000943.2-201ENST00000544019 MSH5O43196 834 aa19.97■□□□□ 0.79
AP000943.2-201ENST00000544019 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
AP000943.2-201ENST00000544019 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
AP000943.2-201ENST00000544019 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
AP000943.2-201ENST00000544019 ADRA2BP18089 450 aa19.62■□□□□ 0.73
AP000943.2-201ENST00000544019 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
AP000943.2-201ENST00000544019 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
AP000943.2-201ENST00000544019 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
AP000943.2-201ENST00000544019 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
AP000943.2-201ENST00000544019 ABCC9O60706 1549 aa18.76■□□□□ 0.59
AP000943.2-201ENST00000544019 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
AP000943.2-201ENST00000544019 NACADO15069 1562 aa18.6■□□□□ 0.57
AP000943.2-201ENST00000544019 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
AP000943.2-201ENST00000544019 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
AP000943.2-201ENST00000544019 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
AP000943.2-201ENST00000544019 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
AP000943.2-201ENST00000544019 MAPK8IP2Q13387 824 aaPredicted RBP18.06■□□□□ 0.48
AP000943.2-201ENST00000544019 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
AP000943.2-201ENST00000544019 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
AP000943.2-201ENST00000544019 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
AP000943.2-201ENST00000544019 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
AP000943.2-201ENST00000544019 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
AP000943.2-201ENST00000544019 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
AP000943.2-201ENST00000544019 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
AP000943.2-201ENST00000544019 MROH2BQ7Z745 1585 aa17.68■□□□□ 0.42
AP000943.2-201ENST00000544019 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
AP000943.2-201ENST00000544019 WIZO95785 1651 aa17.56■□□□□ 0.4
AP000943.2-201ENST00000544019 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
AP000943.2-201ENST00000544019 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
AP000943.2-201ENST00000544019 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
AP000943.2-201ENST00000544019 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
AP000943.2-201ENST00000544019 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
AP000943.2-201ENST00000544019 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
AP000943.2-201ENST00000544019 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
AP000943.2-201ENST00000544019 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
AP000943.2-201ENST00000544019 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
AP000943.2-201ENST00000544019 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
AP000943.2-201ENST00000544019 KCNA4P22459 653 aa17.22■□□□□ 0.35
AP000943.2-201ENST00000544019 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
AP000943.2-201ENST00000544019 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
AP000943.2-201ENST00000544019 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
AP000943.2-201ENST00000544019 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
AP000943.2-201ENST00000544019 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
AP000943.2-201ENST00000544019 NCAPD3P42695 1498 aa17.11■□□□□ 0.33
AP000943.2-201ENST00000544019 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
AP000943.2-201ENST00000544019 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
AP000943.2-201ENST00000544019 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
AP000943.2-201ENST00000544019 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
AP000943.2-201ENST00000544019 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
AP000943.2-201ENST00000544019 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
AP000943.2-201ENST00000544019 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
AP000943.2-201ENST00000544019 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
AP000943.2-201ENST00000544019 CFTRP13569 1480 aa16.76■□□□□ 0.27
AP000943.2-201ENST00000544019 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
AP000943.2-201ENST00000544019 EEA1Q15075 1411 aa16.75■□□□□ 0.27
AP000943.2-201ENST00000544019 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
AP000943.2-201ENST00000544019 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
AP000943.2-201ENST00000544019 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
AP000943.2-201ENST00000544019 TOP2BQ02880 1626 aa16.66■□□□□ 0.26
AP000943.2-201ENST00000544019 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
AP000943.2-201ENST00000544019 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
AP000943.2-201ENST00000544019 SOGA1O94964 1423 aa16.59■□□□□ 0.25
AP000943.2-201ENST00000544019 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
AP000943.2-201ENST00000544019 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
AP000943.2-201ENST00000544019 CUX1P39880 1505 aa16.55■□□□□ 0.24
AP000943.2-201ENST00000544019 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
AP000943.2-201ENST00000544019 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
AP000943.2-201ENST00000544019 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
AP000943.2-201ENST00000544019 GOLGA3Q08378 1498 aa16.5■□□□□ 0.23
AP000943.2-201ENST00000544019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
AP000943.2-201ENST00000544019 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
AP000943.2-201ENST00000544019 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
AP000943.2-201ENST00000544019 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
AP000943.2-201ENST00000544019 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
AP000943.2-201ENST00000544019 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
AP000943.2-201ENST00000544019 KIF21BO75037 1637 aa16.45■□□□□ 0.22
AP000943.2-201ENST00000544019 NESP48681 1621 aa16.45■□□□□ 0.22
AP000943.2-201ENST00000544019 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
AP000943.2-201ENST00000544019 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
AP000943.2-201ENST00000544019 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
AP000943.2-201ENST00000544019 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
AP000943.2-201ENST00000544019 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
AP000943.2-201ENST00000544019 CUX2O14529 1486 aa16.35■□□□□ 0.21
AP000943.2-201ENST00000544019 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
AP000943.2-201ENST00000544019 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
AP000943.2-201ENST00000544019 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.19
AP000943.2-201ENST00000544019 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
AP000943.2-201ENST00000544019 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
AP000943.2-201ENST00000544019 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
AP000943.2-201ENST00000544019 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
AP000943.2-201ENST00000544019 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
AP000943.2-201ENST00000544019 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms