RNA–Protein interactions for RNA: ENST00000542898.5

MEFV-210, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 3,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-210ENST00000542898 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
MEFV-210ENST00000542898 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
MEFV-210ENST00000542898 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
MEFV-210ENST00000542898 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
MEFV-210ENST00000542898 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
MEFV-210ENST00000542898 PCGF6Q9BYE7 350 aa22.29■■□□□ 1.16
MEFV-210ENST00000542898 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
MEFV-210ENST00000542898 HRCP23327 699 aa22.02■■□□□ 1.12
MEFV-210ENST00000542898 ABCC9O60706 1549 aa21.93■■□□□ 1.1
MEFV-210ENST00000542898 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
MEFV-210ENST00000542898 ZCCHC6Q5VYS8 1495 aaKnown RBP21.46■■□□□ 1.03
MEFV-210ENST00000542898 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
MEFV-210ENST00000542898 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
MEFV-210ENST00000542898 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
MEFV-210ENST00000542898 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
MEFV-210ENST00000542898 NACADO15069 1562 aa21.1■□□□□ 0.97
MEFV-210ENST00000542898 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
MEFV-210ENST00000542898 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
MEFV-210ENST00000542898 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
MEFV-210ENST00000542898 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
MEFV-210ENST00000542898 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
MEFV-210ENST00000542898 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
MEFV-210ENST00000542898 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
MEFV-210ENST00000542898 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
MEFV-210ENST00000542898 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
MEFV-210ENST00000542898 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
MEFV-210ENST00000542898 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
MEFV-210ENST00000542898 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
MEFV-210ENST00000542898 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
MEFV-210ENST00000542898 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
MEFV-210ENST00000542898 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
MEFV-210ENST00000542898 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
MEFV-210ENST00000542898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
MEFV-210ENST00000542898 MYT1Q01538 1121 aa20.59■□□□□ 0.89
MEFV-210ENST00000542898 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.88
MEFV-210ENST00000542898 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
MEFV-210ENST00000542898 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
MEFV-210ENST00000542898 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
MEFV-210ENST00000542898 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
MEFV-210ENST00000542898 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
MEFV-210ENST00000542898 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
MEFV-210ENST00000542898 BCANQ96GW7 911 aa19.9■□□□□ 0.78
MEFV-210ENST00000542898 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
MEFV-210ENST00000542898 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
MEFV-210ENST00000542898 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
MEFV-210ENST00000542898 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
MEFV-210ENST00000542898 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
MEFV-210ENST00000542898 MIER1Q8N108 512 aa19.78■□□□□ 0.76
MEFV-210ENST00000542898 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
MEFV-210ENST00000542898 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
MEFV-210ENST00000542898 WIZO95785 1651 aa19.73■□□□□ 0.75
MEFV-210ENST00000542898 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
MEFV-210ENST00000542898 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
MEFV-210ENST00000542898 BCL11AQ9H165 835 aa19.63■□□□□ 0.73
MEFV-210ENST00000542898 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
MEFV-210ENST00000542898 ERICH6Q7L0X2 663 aa19.6■□□□□ 0.73
MEFV-210ENST00000542898 APLP2Q06481 763 aa19.53■□□□□ 0.72
MEFV-210ENST00000542898 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
MEFV-210ENST00000542898 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
MEFV-210ENST00000542898 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
MEFV-210ENST00000542898 ANP32EQ9BTT0 268 aa19.43■□□□□ 0.7
MEFV-210ENST00000542898 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
MEFV-210ENST00000542898 NEFLP07196 543 aa19.41■□□□□ 0.7
MEFV-210ENST00000542898 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
MEFV-210ENST00000542898 ITGAEP38570 1179 aa19.4■□□□□ 0.7
MEFV-210ENST00000542898 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
MEFV-210ENST00000542898 SUPT16HQ9Y5B9 1047 aaKnown RBP19.35■□□□□ 0.69
MEFV-210ENST00000542898 FKBP8Q14318 412 aa19.32■□□□□ 0.68
MEFV-210ENST00000542898 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
MEFV-210ENST00000542898 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
MEFV-210ENST00000542898 NESP48681 1621 aa19.17■□□□□ 0.66
MEFV-210ENST00000542898 TRIM52Q96A61 297 aa19.13■□□□□ 0.65
MEFV-210ENST00000542898 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
MEFV-210ENST00000542898 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
MEFV-210ENST00000542898 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
MEFV-210ENST00000542898 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
MEFV-210ENST00000542898 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
MEFV-210ENST00000542898 NBR1Q14596 966 aa18.99■□□□□ 0.63
MEFV-210ENST00000542898 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
MEFV-210ENST00000542898 CFTRP13569 1480 aa18.97■□□□□ 0.63
MEFV-210ENST00000542898 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
MEFV-210ENST00000542898 RBM19Q9Y4C8 960 aaKnown RBP18.96■□□□□ 0.63
MEFV-210ENST00000542898 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
MEFV-210ENST00000542898 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
MEFV-210ENST00000542898 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
MEFV-210ENST00000542898 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
MEFV-210ENST00000542898 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
MEFV-210ENST00000542898 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
MEFV-210ENST00000542898 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
MEFV-210ENST00000542898 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
MEFV-210ENST00000542898 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
MEFV-210ENST00000542898 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
MEFV-210ENST00000542898 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
MEFV-210ENST00000542898 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
MEFV-210ENST00000542898 ANP32CO43423 234 aa18.73■□□□□ 0.59
MEFV-210ENST00000542898 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
MEFV-210ENST00000542898 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
MEFV-210ENST00000542898 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
MEFV-210ENST00000542898 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
MEFV-210ENST00000542898 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms