RNA–Protein interactions for RNA: ENST00000540568.1

ULK1-203, Transcript of unc-51 like autophagy activating kinase 1, humanhuman

TSL 2

Gene ULK1, Length 2,145 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK1-203ENST00000540568 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
ULK1-203ENST00000540568 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
ULK1-203ENST00000540568 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
ULK1-203ENST00000540568 SHROOM4Q9ULL8 1493 aa32.59■■■□□ 2.81
ULK1-203ENST00000540568 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
ULK1-203ENST00000540568 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
ULK1-203ENST00000540568 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
ULK1-203ENST00000540568 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
ULK1-203ENST00000540568 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.58
ULK1-203ENST00000540568 ABCC9O60706 1549 aa30.97■■■□□ 2.55
ULK1-203ENST00000540568 SCRIBQ14160 1630 aa30.66■■■□□ 2.5
ULK1-203ENST00000540568 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
ULK1-203ENST00000540568 HRCP23327 699 aa30.55■■■□□ 2.48
ULK1-203ENST00000540568 NACADO15069 1562 aa30.5■■■□□ 2.47
ULK1-203ENST00000540568 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
ULK1-203ENST00000540568 PCGF6Q9BYE7 350 aa30.3■■■□□ 2.44
ULK1-203ENST00000540568 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
ULK1-203ENST00000540568 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
ULK1-203ENST00000540568 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
ULK1-203ENST00000540568 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
ULK1-203ENST00000540568 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
ULK1-203ENST00000540568 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
ULK1-203ENST00000540568 WIZO95785 1651 aa29.79■■■□□ 2.36
ULK1-203ENST00000540568 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
ULK1-203ENST00000540568 PPARGC1BQ86YN6 1023 aaKnown RBP29.59■■■□□ 2.33
ULK1-203ENST00000540568 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.31
ULK1-203ENST00000540568 FAM9AQ8IZU1 332 aaPredicted RBP29.5■■■□□ 2.31
ULK1-203ENST00000540568 ZEB1P37275 1124 aaPredicted RBP29.48■■■□□ 2.31
ULK1-203ENST00000540568 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
ULK1-203ENST00000540568 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
ULK1-203ENST00000540568 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
ULK1-203ENST00000540568 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
ULK1-203ENST00000540568 ABCC8Q09428 1581 aa29.08■■■□□ 2.25
ULK1-203ENST00000540568 EEA1Q15075 1411 aa29.04■■■□□ 2.24
ULK1-203ENST00000540568 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
ULK1-203ENST00000540568 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
ULK1-203ENST00000540568 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
ULK1-203ENST00000540568 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
ULK1-203ENST00000540568 TNIKQ9UKE5 1360 aa28.89■■■□□ 2.21
ULK1-203ENST00000540568 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
ULK1-203ENST00000540568 SOGA1O94964 1423 aa28.83■■■□□ 2.21
ULK1-203ENST00000540568 CSRNP3Q8WYN3 585 aa28.75■■■□□ 2.19
ULK1-203ENST00000540568 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
ULK1-203ENST00000540568 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
ULK1-203ENST00000540568 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
ULK1-203ENST00000540568 RUSC2Q8N2Y8 1516 aa28.63■■■□□ 2.17
ULK1-203ENST00000540568 KIF21BO75037 1637 aa28.58■■■□□ 2.17
ULK1-203ENST00000540568 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
ULK1-203ENST00000540568 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
ULK1-203ENST00000540568 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
ULK1-203ENST00000540568 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
ULK1-203ENST00000540568 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
ULK1-203ENST00000540568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.49■■■□□ 2.15
ULK1-203ENST00000540568 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
ULK1-203ENST00000540568 CLIP1P30622 1438 aa28.3■■■□□ 2.12
ULK1-203ENST00000540568 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
ULK1-203ENST00000540568 VPS8Q8N3P4 1428 aa28.25■■■□□ 2.11
ULK1-203ENST00000540568 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
ULK1-203ENST00000540568 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
ULK1-203ENST00000540568 RAPGEF2Q9Y4G8 1499 aa28.18■■■□□ 2.1
ULK1-203ENST00000540568 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
ULK1-203ENST00000540568 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
ULK1-203ENST00000540568 PRXQ9BXM0 1461 aa28.05■■■□□ 2.08
ULK1-203ENST00000540568 DIEXFQ68CQ4 756 aaKnown RBP28.04■■■□□ 2.08
ULK1-203ENST00000540568 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
ULK1-203ENST00000540568 APLP2Q06481 763 aa28■■■□□ 2.07
ULK1-203ENST00000540568 CUX1P39880 1505 aa27.94■■■□□ 2.06
ULK1-203ENST00000540568 CFTRP13569 1480 aa27.93■■■□□ 2.06
ULK1-203ENST00000540568 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
ULK1-203ENST00000540568 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
ULK1-203ENST00000540568 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
ULK1-203ENST00000540568 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.05
ULK1-203ENST00000540568 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
ULK1-203ENST00000540568 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
ULK1-203ENST00000540568 CENPBP07199 599 aaPredicted RBP27.82■■■□□ 2.04
ULK1-203ENST00000540568 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
ULK1-203ENST00000540568 CLSPNQ9HAW4 1339 aa27.74■■■□□ 2.03
ULK1-203ENST00000540568 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
ULK1-203ENST00000540568 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.02
ULK1-203ENST00000540568 RRBP1Q9P2E9 1410 aaKnown RBP27.64■■■□□ 2.02
ULK1-203ENST00000540568 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
ULK1-203ENST00000540568 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
ULK1-203ENST00000540568 CUX2O14529 1486 aa27.56■■■□□ 2
ULK1-203ENST00000540568 DHX57Q6P158 1386 aaKnown RBP27.53■■■□□ 2
ULK1-203ENST00000540568 KANK4Q5T7N3 995 aaPredicted RBP27.52■■■□□ 2
ULK1-203ENST00000540568 MAP3K1Q13233 1512 aa27.51■■■□□ 2
ULK1-203ENST00000540568 IGF1RP08069 1367 aa27.5■■□□□ 1.99
ULK1-203ENST00000540568 GTF3C3Q9Y5Q9 886 aa27.46■■□□□ 1.99
ULK1-203ENST00000540568 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
ULK1-203ENST00000540568 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
ULK1-203ENST00000540568 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.98
ULK1-203ENST00000540568 TIAM1Q13009 1591 aa27.37■■□□□ 1.97
ULK1-203ENST00000540568 MIER1Q8N108 512 aa27.36■■□□□ 1.97
ULK1-203ENST00000540568 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
ULK1-203ENST00000540568 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
ULK1-203ENST00000540568 FANCD2Q9BXW9 1451 aa27.26■■□□□ 1.95
ULK1-203ENST00000540568 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
ULK1-203ENST00000540568 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
ULK1-203ENST00000540568 CFAP43Q8NDM7 1665 aa27.22■■□□□ 1.95
ULK1-203ENST00000540568 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms