RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
MRE11-206ENST00000536144 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
MRE11-206ENST00000536144 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
MRE11-206ENST00000536144 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
MRE11-206ENST00000536144 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
MRE11-206ENST00000536144 FOXD1Q16676 465 aa21.36■■□□□ 1.01
MRE11-206ENST00000536144 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
MRE11-206ENST00000536144 ADRA2BP18089 450 aa20.43■□□□□ 0.86
MRE11-206ENST00000536144 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
MRE11-206ENST00000536144 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
MRE11-206ENST00000536144 MSH5O43196 834 aa19.79■□□□□ 0.76
MRE11-206ENST00000536144 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
MRE11-206ENST00000536144 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
MRE11-206ENST00000536144 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
MRE11-206ENST00000536144 ABCC9O60706 1549 aa18.65■□□□□ 0.58
MRE11-206ENST00000536144 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
MRE11-206ENST00000536144 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
MRE11-206ENST00000536144 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
MRE11-206ENST00000536144 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
MRE11-206ENST00000536144 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
MRE11-206ENST00000536144 KCNA4P22459 653 aa18.06■□□□□ 0.48
MRE11-206ENST00000536144 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
MRE11-206ENST00000536144 NACADO15069 1562 aa18.02■□□□□ 0.48
MRE11-206ENST00000536144 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
MRE11-206ENST00000536144 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
MRE11-206ENST00000536144 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
MRE11-206ENST00000536144 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
MRE11-206ENST00000536144 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
MRE11-206ENST00000536144 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
MRE11-206ENST00000536144 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
MRE11-206ENST00000536144 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
MRE11-206ENST00000536144 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
MRE11-206ENST00000536144 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
MRE11-206ENST00000536144 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
MRE11-206ENST00000536144 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
MRE11-206ENST00000536144 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
MRE11-206ENST00000536144 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
MRE11-206ENST00000536144 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
MRE11-206ENST00000536144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
MRE11-206ENST00000536144 EIF4G1Q04637 1599 aaKnown RBP16.97■□□□□ 0.31
MRE11-206ENST00000536144 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
MRE11-206ENST00000536144 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
MRE11-206ENST00000536144 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
MRE11-206ENST00000536144 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
MRE11-206ENST00000536144 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
MRE11-206ENST00000536144 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
MRE11-206ENST00000536144 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
MRE11-206ENST00000536144 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
MRE11-206ENST00000536144 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
MRE11-206ENST00000536144 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
MRE11-206ENST00000536144 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
MRE11-206ENST00000536144 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
MRE11-206ENST00000536144 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
MRE11-206ENST00000536144 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
MRE11-206ENST00000536144 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
MRE11-206ENST00000536144 ZBTB22O15209 634 aa16.57■□□□□ 0.24
MRE11-206ENST00000536144 HMGXB3Q12766 1538 aa16.54■□□□□ 0.24
MRE11-206ENST00000536144 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
MRE11-206ENST00000536144 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
MRE11-206ENST00000536144 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
MRE11-206ENST00000536144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
MRE11-206ENST00000536144 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
MRE11-206ENST00000536144 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
MRE11-206ENST00000536144 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
MRE11-206ENST00000536144 WIZO95785 1651 aa16.42■□□□□ 0.22
MRE11-206ENST00000536144 APLP2Q06481 763 aa16.39■□□□□ 0.21
MRE11-206ENST00000536144 CAPN15O75808 1086 aa16.36■□□□□ 0.21
MRE11-206ENST00000536144 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
MRE11-206ENST00000536144 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
MRE11-206ENST00000536144 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
MRE11-206ENST00000536144 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
MRE11-206ENST00000536144 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
MRE11-206ENST00000536144 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
MRE11-206ENST00000536144 NESP48681 1621 aa16.16■□□□□ 0.18
MRE11-206ENST00000536144 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
MRE11-206ENST00000536144 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
MRE11-206ENST00000536144 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
MRE11-206ENST00000536144 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
MRE11-206ENST00000536144 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
MRE11-206ENST00000536144 CFTRP13569 1480 aa16.1■□□□□ 0.17
MRE11-206ENST00000536144 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
MRE11-206ENST00000536144 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
MRE11-206ENST00000536144 DSG3P32926 999 aa16.04■□□□□ 0.16
MRE11-206ENST00000536144 ABCB7O75027 752 aa16.02■□□□□ 0.16
MRE11-206ENST00000536144 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
MRE11-206ENST00000536144 CUX2O14529 1486 aa15.91■□□□□ 0.14
MRE11-206ENST00000536144 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
MRE11-206ENST00000536144 POLA2Q14181 598 aa15.91■□□□□ 0.14
MRE11-206ENST00000536144 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
MRE11-206ENST00000536144 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
MRE11-206ENST00000536144 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
MRE11-206ENST00000536144 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
MRE11-206ENST00000536144 WDR62O43379 1518 aa15.82■□□□□ 0.12
MRE11-206ENST00000536144 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
MRE11-206ENST00000536144 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
MRE11-206ENST00000536144 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
MRE11-206ENST00000536144 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
MRE11-206ENST00000536144 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
MRE11-206ENST00000536144 CUX1P39880 1505 aa15.6■□□□□ 0.09
MRE11-206ENST00000536144 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms