RNA–Protein interactions for RNA: ENST00000533026.6

KIRREL3-207, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 2,063 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-207ENST00000533026 NISCHQ9Y2I1 1504 aa45.34■■■■■ 4.85
KIRREL3-207ENST00000533026 CCDC180Q9P1Z9 1646 aa38.73■■■■□ 3.79
KIRREL3-207ENST00000533026 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
KIRREL3-207ENST00000533026 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
KIRREL3-207ENST00000533026 SUPT5HO00267 1087 aaKnown RBP37.67■■■■□ 3.62
KIRREL3-207ENST00000533026 DCAF1Q9Y4B6 1507 aa37.44■■■■□ 3.58
KIRREL3-207ENST00000533026 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
KIRREL3-207ENST00000533026 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
KIRREL3-207ENST00000533026 MYO15BQ96JP2 1530 aa36.71■■■■□ 3.47
KIRREL3-207ENST00000533026 ABCC9O60706 1549 aa36.31■■■■□ 3.4
KIRREL3-207ENST00000533026 HRCP23327 699 aa36.04■■■■□ 3.36
KIRREL3-207ENST00000533026 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
KIRREL3-207ENST00000533026 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
KIRREL3-207ENST00000533026 PCGF6Q9BYE7 350 aa35.74■■■■□ 3.31
KIRREL3-207ENST00000533026 NACADO15069 1562 aa35.69■■■■□ 3.3
KIRREL3-207ENST00000533026 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
KIRREL3-207ENST00000533026 LOC105371045A0A1W2PR82 267 aa35.58■■■■□ 3.29
KIRREL3-207ENST00000533026 TRIM26Q12899 539 aaPredicted RBP35.27■■■■□ 3.24
KIRREL3-207ENST00000533026 TRIM41Q8WV44 630 aa35.25■■■■□ 3.23
KIRREL3-207ENST00000533026 CECR2Q9BXF3 1484 aa35.15■■■■□ 3.22
KIRREL3-207ENST00000533026 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
KIRREL3-207ENST00000533026 WIZO95785 1651 aa34.97■■■■□ 3.19
KIRREL3-207ENST00000533026 BAZ1AQ9NRL2 1556 aaPredicted RBP34.95■■■■□ 3.19
KIRREL3-207ENST00000533026 PPARGC1BQ86YN6 1023 aaKnown RBP34.93■■■■□ 3.18
KIRREL3-207ENST00000533026 ZEB1P37275 1124 aaPredicted RBP34.74■■■■□ 3.15
KIRREL3-207ENST00000533026 EIF4G1Q04637 1599 aaKnown RBP34.72■■■■□ 3.15
KIRREL3-207ENST00000533026 FAM9AQ8IZU1 332 aaPredicted RBP34.72■■■■□ 3.15
KIRREL3-207ENST00000533026 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
KIRREL3-207ENST00000533026 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
KIRREL3-207ENST00000533026 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
KIRREL3-207ENST00000533026 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
KIRREL3-207ENST00000533026 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
KIRREL3-207ENST00000533026 EHMT2Q96KQ7 1210 aa34.22■■■■□ 3.07
KIRREL3-207ENST00000533026 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
KIRREL3-207ENST00000533026 EEA1Q15075 1411 aa34.06■■■■□ 3.04
KIRREL3-207ENST00000533026 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
KIRREL3-207ENST00000533026 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
KIRREL3-207ENST00000533026 BICRAQ9NZM4 1560 aa33.96■■■■□ 3.03
KIRREL3-207ENST00000533026 TNIKQ9UKE5 1360 aa33.9■■■■□ 3.02
KIRREL3-207ENST00000533026 CEP162Q5TB80 1403 aa33.87■■■■□ 3.01
KIRREL3-207ENST00000533026 SOGA1O94964 1423 aa33.84■■■■□ 3.01
KIRREL3-207ENST00000533026 CSRNP3Q8WYN3 585 aa33.75■■■□□ 2.99
KIRREL3-207ENST00000533026 GOLGA3Q08378 1498 aa33.7■■■□□ 2.98
KIRREL3-207ENST00000533026 CCER1Q8TC90 406 aaPredicted RBP33.64■■■□□ 2.98
KIRREL3-207ENST00000533026 RUSC2Q8N2Y8 1516 aa33.62■■■□□ 2.97
KIRREL3-207ENST00000533026 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
KIRREL3-207ENST00000533026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.58■■■□□ 2.97
KIRREL3-207ENST00000533026 KIF21BO75037 1637 aa33.55■■■□□ 2.96
KIRREL3-207ENST00000533026 ATAD2BQ9ULI0 1458 aa33.54■■■□□ 2.96
KIRREL3-207ENST00000533026 UBTFP17480 764 aaKnown RBP33.51■■■□□ 2.96
KIRREL3-207ENST00000533026 CEP164Q9UPV0 1460 aa33.51■■■□□ 2.95
KIRREL3-207ENST00000533026 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
KIRREL3-207ENST00000533026 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
KIRREL3-207ENST00000533026 CLIP1P30622 1438 aa33.22■■■□□ 2.91
KIRREL3-207ENST00000533026 TTBK1Q5TCY1 1321 aaPredicted RBP33.22■■■□□ 2.91
KIRREL3-207ENST00000533026 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
KIRREL3-207ENST00000533026 VPS8Q8N3P4 1428 aa33.16■■■□□ 2.9
KIRREL3-207ENST00000533026 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
KIRREL3-207ENST00000533026 SCAF1Q9H7N4 1312 aaKnown RBP33.14■■■□□ 2.9
KIRREL3-207ENST00000533026 DIEXFQ68CQ4 756 aaKnown RBP33.08■■■□□ 2.89
KIRREL3-207ENST00000533026 RAPGEF2Q9Y4G8 1499 aa33.07■■■□□ 2.88
KIRREL3-207ENST00000533026 HMGXB3Q12766 1538 aa33.03■■■□□ 2.88
KIRREL3-207ENST00000533026 PELP1Q8IZL8 1130 aaKnown RBP33.02■■■□□ 2.88
KIRREL3-207ENST00000533026 ERICH3Q5RHP9 1530 aa33■■■□□ 2.87
KIRREL3-207ENST00000533026 NCAPD3P42695 1498 aa32.94■■■□□ 2.86
KIRREL3-207ENST00000533026 APLP2Q06481 763 aa32.93■■■□□ 2.86
KIRREL3-207ENST00000533026 ACIN1Q9UKV3 1341 aaKnown RBP32.93■■■□□ 2.86
KIRREL3-207ENST00000533026 ZNF316A6NFI3 1004 aaPredicted RBP32.87■■■□□ 2.85
KIRREL3-207ENST00000533026 PRXQ9BXM0 1461 aa32.87■■■□□ 2.85
KIRREL3-207ENST00000533026 CENPBP07199 599 aaPredicted RBP32.85■■■□□ 2.85
KIRREL3-207ENST00000533026 HNRNPUL2Q1KMD3 747 aaKnown RBP32.76■■■□□ 2.84
KIRREL3-207ENST00000533026 CUX1P39880 1505 aa32.74■■■□□ 2.83
KIRREL3-207ENST00000533026 NEUROD1Q13562 356 aa32.74■■■□□ 2.83
KIRREL3-207ENST00000533026 KIF27Q86VH2 1401 aa32.69■■■□□ 2.82
KIRREL3-207ENST00000533026 CFTRP13569 1480 aa32.69■■■□□ 2.82
KIRREL3-207ENST00000533026 ARAP1Q96P48 1450 aa32.68■■■□□ 2.82
KIRREL3-207ENST00000533026 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
KIRREL3-207ENST00000533026 CLSPNQ9HAW4 1339 aa32.6■■■□□ 2.81
KIRREL3-207ENST00000533026 RANGAP1P46060 587 aaPredicted RBP32.52■■■□□ 2.8
KIRREL3-207ENST00000533026 RRBP1Q9P2E9 1410 aaKnown RBP32.45■■■□□ 2.78
KIRREL3-207ENST00000533026 GTF3C3Q9Y5Q9 886 aa32.44■■■□□ 2.78
KIRREL3-207ENST00000533026 ARHGAP35Q9NRY4 1499 aa32.37■■■□□ 2.77
KIRREL3-207ENST00000533026 DHX57Q6P158 1386 aaKnown RBP32.36■■■□□ 2.77
KIRREL3-207ENST00000533026 CUX2O14529 1486 aa32.34■■■□□ 2.77
KIRREL3-207ENST00000533026 KANK4Q5T7N3 995 aaPredicted RBP32.33■■■□□ 2.77
KIRREL3-207ENST00000533026 MAP3K1Q13233 1512 aa32.27■■■□□ 2.76
KIRREL3-207ENST00000533026 MIER1Q8N108 512 aa32.26■■■□□ 2.75
KIRREL3-207ENST00000533026 CADPSQ9ULU8 1353 aa32.24■■■□□ 2.75
KIRREL3-207ENST00000533026 IGF1RP08069 1367 aa32.22■■■□□ 2.75
KIRREL3-207ENST00000533026 CCNB3Q8WWL7 1395 aa32.22■■■□□ 2.75
KIRREL3-207ENST00000533026 TIAM1Q13009 1591 aa32.14■■■□□ 2.74
KIRREL3-207ENST00000533026 FGD5Q6ZNL6 1462 aa32.13■■■□□ 2.73
KIRREL3-207ENST00000533026 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
KIRREL3-207ENST00000533026 YTHDC1Q96MU7 727 aaKnown RBP32.09■■■□□ 2.73
KIRREL3-207ENST00000533026 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.71
KIRREL3-207ENST00000533026 CFAP43Q8NDM7 1665 aa31.98■■■□□ 2.71
KIRREL3-207ENST00000533026 LRRC9Q6ZRR7 1453 aa31.97■■■□□ 2.71
KIRREL3-207ENST00000533026 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
KIRREL3-207ENST00000533026 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
KIRREL3-207ENST00000533026 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms