RNA–Protein interactions for RNA: ENST00000533023.5

MS4A6A-217, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3 BASIC

Gene MS4A6A, Length 780 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-217ENST00000533023 CHIC1Q5VXU3 224 aa24.3■■□□□ 1.48
MS4A6A-217ENST00000533023 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
MS4A6A-217ENST00000533023 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
MS4A6A-217ENST00000533023 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
MS4A6A-217ENST00000533023 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
MS4A6A-217ENST00000533023 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
MS4A6A-217ENST00000533023 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
MS4A6A-217ENST00000533023 FOXD1Q16676 465 aa18.85■□□□□ 0.61
MS4A6A-217ENST00000533023 ADRA2BP18089 450 aa18.67■□□□□ 0.58
MS4A6A-217ENST00000533023 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
MS4A6A-217ENST00000533023 ABCC9O60706 1549 aa18.41■□□□□ 0.54
MS4A6A-217ENST00000533023 KCNA4P22459 653 aa18.04■□□□□ 0.48
MS4A6A-217ENST00000533023 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
MS4A6A-217ENST00000533023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
MS4A6A-217ENST00000533023 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
MS4A6A-217ENST00000533023 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
MS4A6A-217ENST00000533023 NACADO15069 1562 aa17.69■□□□□ 0.42
MS4A6A-217ENST00000533023 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
MS4A6A-217ENST00000533023 UNC13AQ9UPW8 1703 aa17.59■□□□□ 0.41
MS4A6A-217ENST00000533023 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.41
MS4A6A-217ENST00000533023 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
MS4A6A-217ENST00000533023 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
MS4A6A-217ENST00000533023 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
MS4A6A-217ENST00000533023 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
MS4A6A-217ENST00000533023 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
MS4A6A-217ENST00000533023 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
MS4A6A-217ENST00000533023 MSH5O43196 834 aa17.19■□□□□ 0.34
MS4A6A-217ENST00000533023 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
MS4A6A-217ENST00000533023 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
MS4A6A-217ENST00000533023 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
MS4A6A-217ENST00000533023 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
MS4A6A-217ENST00000533023 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
MS4A6A-217ENST00000533023 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
MS4A6A-217ENST00000533023 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
MS4A6A-217ENST00000533023 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
MS4A6A-217ENST00000533023 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
MS4A6A-217ENST00000533023 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
MS4A6A-217ENST00000533023 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
MS4A6A-217ENST00000533023 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
MS4A6A-217ENST00000533023 ZBTB22O15209 634 aa16.6■□□□□ 0.25
MS4A6A-217ENST00000533023 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
MS4A6A-217ENST00000533023 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
MS4A6A-217ENST00000533023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
MS4A6A-217ENST00000533023 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
MS4A6A-217ENST00000533023 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
MS4A6A-217ENST00000533023 WIZO95785 1651 aa16.4■□□□□ 0.22
MS4A6A-217ENST00000533023 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
MS4A6A-217ENST00000533023 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
MS4A6A-217ENST00000533023 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
MS4A6A-217ENST00000533023 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
MS4A6A-217ENST00000533023 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
MS4A6A-217ENST00000533023 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
MS4A6A-217ENST00000533023 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
MS4A6A-217ENST00000533023 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
MS4A6A-217ENST00000533023 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.18
MS4A6A-217ENST00000533023 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
MS4A6A-217ENST00000533023 NESP48681 1621 aa16.03■□□□□ 0.16
MS4A6A-217ENST00000533023 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
MS4A6A-217ENST00000533023 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
MS4A6A-217ENST00000533023 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
MS4A6A-217ENST00000533023 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
MS4A6A-217ENST00000533023 ATXN8OSP0DMR3 200 aa15.9■□□□□ 0.14
MS4A6A-217ENST00000533023 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
MS4A6A-217ENST00000533023 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
MS4A6A-217ENST00000533023 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
MS4A6A-217ENST00000533023 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
MS4A6A-217ENST00000533023 CFTRP13569 1480 aa15.78■□□□□ 0.12
MS4A6A-217ENST00000533023 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
MS4A6A-217ENST00000533023 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
MS4A6A-217ENST00000533023 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
MS4A6A-217ENST00000533023 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
MS4A6A-217ENST00000533023 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
MS4A6A-217ENST00000533023 WDR62O43379 1518 aa15.61■□□□□ 0.09
MS4A6A-217ENST00000533023 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
MS4A6A-217ENST00000533023 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
MS4A6A-217ENST00000533023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.08
MS4A6A-217ENST00000533023 CUX2O14529 1486 aa15.53■□□□□ 0.08
MS4A6A-217ENST00000533023 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
MS4A6A-217ENST00000533023 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
MS4A6A-217ENST00000533023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
MS4A6A-217ENST00000533023 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
MS4A6A-217ENST00000533023 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
MS4A6A-217ENST00000533023 CUX1P39880 1505 aa15.48■□□□□ 0.07
MS4A6A-217ENST00000533023 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
MS4A6A-217ENST00000533023 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
MS4A6A-217ENST00000533023 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
MS4A6A-217ENST00000533023 FKBP8Q14318 412 aa15.39■□□□□ 0.05
MS4A6A-217ENST00000533023 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
MS4A6A-217ENST00000533023 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
MS4A6A-217ENST00000533023 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
MS4A6A-217ENST00000533023 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
MS4A6A-217ENST00000533023 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
MS4A6A-217ENST00000533023 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
MS4A6A-217ENST00000533023 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
MS4A6A-217ENST00000533023 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
MS4A6A-217ENST00000533023 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
MS4A6A-217ENST00000533023 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
MS4A6A-217ENST00000533023 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.04
MS4A6A-217ENST00000533023 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
MS4A6A-217ENST00000533023 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms