RNA–Protein interactions for RNA: ENST00000532118.5

RDX-212, Transcript of radixin, humanhuman

TSL 5

Gene RDX, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-212ENST00000532118 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
RDX-212ENST00000532118 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
RDX-212ENST00000532118 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
RDX-212ENST00000532118 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
RDX-212ENST00000532118 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
RDX-212ENST00000532118 FOXD1Q16676 465 aa18.56■□□□□ 0.56
RDX-212ENST00000532118 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
RDX-212ENST00000532118 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
RDX-212ENST00000532118 ADRA2BP18089 450 aa17.53■□□□□ 0.4
RDX-212ENST00000532118 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
RDX-212ENST00000532118 MSH5O43196 834 aa17.16■□□□□ 0.34
RDX-212ENST00000532118 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
RDX-212ENST00000532118 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
RDX-212ENST00000532118 ABCC9O60706 1549 aa16.19■□□□□ 0.18
RDX-212ENST00000532118 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
RDX-212ENST00000532118 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
RDX-212ENST00000532118 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
RDX-212ENST00000532118 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
RDX-212ENST00000532118 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
RDX-212ENST00000532118 NACADO15069 1562 aa15.68■□□□□ 0.1
RDX-212ENST00000532118 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
RDX-212ENST00000532118 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
RDX-212ENST00000532118 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
RDX-212ENST00000532118 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
RDX-212ENST00000532118 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
RDX-212ENST00000532118 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
RDX-212ENST00000532118 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
RDX-212ENST00000532118 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
RDX-212ENST00000532118 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
RDX-212ENST00000532118 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
RDX-212ENST00000532118 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
RDX-212ENST00000532118 PABPN1Q86U42 306 aaKnown RBP eCLIP15.16■□□□□ 0.02
RDX-212ENST00000532118 KCNA4P22459 653 aa15.14■□□□□ 0.01
RDX-212ENST00000532118 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
RDX-212ENST00000532118 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
RDX-212ENST00000532118 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
RDX-212ENST00000532118 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
RDX-212ENST00000532118 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
RDX-212ENST00000532118 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
RDX-212ENST00000532118 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
RDX-212ENST00000532118 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
RDX-212ENST00000532118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.083e-6■□□□□ 9.6
RDX-212ENST00000532118 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.08
RDX-212ENST00000532118 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
RDX-212ENST00000532118 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
RDX-212ENST00000532118 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
RDX-212ENST00000532118 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
RDX-212ENST00000532118 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
RDX-212ENST00000532118 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
RDX-212ENST00000532118 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
RDX-212ENST00000532118 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
RDX-212ENST00000532118 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
RDX-212ENST00000532118 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
RDX-212ENST00000532118 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
RDX-212ENST00000532118 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
RDX-212ENST00000532118 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
RDX-212ENST00000532118 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
RDX-212ENST00000532118 WIZO95785 1651 aa14.27□□□□□ -0.12
RDX-212ENST00000532118 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
RDX-212ENST00000532118 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
RDX-212ENST00000532118 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
RDX-212ENST00000532118 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
RDX-212ENST00000532118 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
RDX-212ENST00000532118 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
RDX-212ENST00000532118 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.16
RDX-212ENST00000532118 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
RDX-212ENST00000532118 NESP48681 1621 aa14□□□□□ -0.17
RDX-212ENST00000532118 ZBTB22O15209 634 aa13.98□□□□□ -0.17
RDX-212ENST00000532118 CAPN15O75808 1086 aa13.98□□□□□ -0.17
RDX-212ENST00000532118 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
RDX-212ENST00000532118 CFTRP13569 1480 aa13.96□□□□□ -0.17
RDX-212ENST00000532118 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
RDX-212ENST00000532118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
RDX-212ENST00000532118 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
RDX-212ENST00000532118 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
RDX-212ENST00000532118 DSG3P32926 999 aa13.89□□□□□ -0.19
RDX-212ENST00000532118 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
RDX-212ENST00000532118 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
RDX-212ENST00000532118 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
RDX-212ENST00000532118 APLP2Q06481 763 aa13.84□□□□□ -0.19
RDX-212ENST00000532118 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
RDX-212ENST00000532118 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
RDX-212ENST00000532118 CUX2O14529 1486 aa13.83□□□□□ -0.2
RDX-212ENST00000532118 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
RDX-212ENST00000532118 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
RDX-212ENST00000532118 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
RDX-212ENST00000532118 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
RDX-212ENST00000532118 ABCB7O75027 752 aa13.74□□□□□ -0.21
RDX-212ENST00000532118 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
RDX-212ENST00000532118 WDR62O43379 1518 aa13.72□□□□□ -0.21
RDX-212ENST00000532118 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
RDX-212ENST00000532118 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
RDX-212ENST00000532118 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
RDX-212ENST00000532118 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
RDX-212ENST00000532118 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
RDX-212ENST00000532118 POLA2Q14181 598 aa13.55□□□□□ -0.24
RDX-212ENST00000532118 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
RDX-212ENST00000532118 SOGA1O94964 1423 aa13.54□□□□□ -0.24
RDX-212ENST00000532118 CUX1P39880 1505 aa13.54□□□□□ -0.24
RDX-212ENST00000532118 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms