RNA–Protein interactions for RNA: ENST00000531052.1

CDKL1-208, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 3

Gene CDKL1, Length 704 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-208ENST00000531052 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
CDKL1-208ENST00000531052 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
CDKL1-208ENST00000531052 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
CDKL1-208ENST00000531052 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
CDKL1-208ENST00000531052 NISCHQ9Y2I1 1504 aa14.35□□□□□ -0.11
CDKL1-208ENST00000531052 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
CDKL1-208ENST00000531052 FOXD1Q16676 465 aa14.15□□□□□ -0.14
CDKL1-208ENST00000531052 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
CDKL1-208ENST00000531052 ADRA2BP18089 450 aa13.59□□□□□ -0.23
CDKL1-208ENST00000531052 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
CDKL1-208ENST00000531052 MSH5O43196 834 aa12.94□□□□□ -0.34
CDKL1-208ENST00000531052 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
CDKL1-208ENST00000531052 ABCC9O60706 1549 aa12.8□□□□□ -0.36
CDKL1-208ENST00000531052 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
CDKL1-208ENST00000531052 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
CDKL1-208ENST00000531052 KCNA4P22459 653 aa12.27□□□□□ -0.45
CDKL1-208ENST00000531052 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
CDKL1-208ENST00000531052 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
CDKL1-208ENST00000531052 NACADO15069 1562 aa12.18□□□□□ -0.46
CDKL1-208ENST00000531052 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
CDKL1-208ENST00000531052 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
CDKL1-208ENST00000531052 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
CDKL1-208ENST00000531052 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
CDKL1-208ENST00000531052 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
CDKL1-208ENST00000531052 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
CDKL1-208ENST00000531052 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
CDKL1-208ENST00000531052 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
CDKL1-208ENST00000531052 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
CDKL1-208ENST00000531052 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
CDKL1-208ENST00000531052 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CDKL1-208ENST00000531052 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
CDKL1-208ENST00000531052 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
CDKL1-208ENST00000531052 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDKL1-208ENST00000531052 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
CDKL1-208ENST00000531052 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
CDKL1-208ENST00000531052 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
CDKL1-208ENST00000531052 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
CDKL1-208ENST00000531052 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
CDKL1-208ENST00000531052 EIF4G1Q04637 1599 aaKnown RBP11.59□□□□□ -0.55
CDKL1-208ENST00000531052 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
CDKL1-208ENST00000531052 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
CDKL1-208ENST00000531052 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
CDKL1-208ENST00000531052 ZBTB22O15209 634 aa11.37□□□□□ -0.59
CDKL1-208ENST00000531052 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
CDKL1-208ENST00000531052 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
CDKL1-208ENST00000531052 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
CDKL1-208ENST00000531052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDKL1-208ENST00000531052 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
CDKL1-208ENST00000531052 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
CDKL1-208ENST00000531052 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
CDKL1-208ENST00000531052 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
CDKL1-208ENST00000531052 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
CDKL1-208ENST00000531052 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
CDKL1-208ENST00000531052 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
CDKL1-208ENST00000531052 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
CDKL1-208ENST00000531052 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
CDKL1-208ENST00000531052 BAZ1BQ9UIG0 1483 aaKnown RBP11.08□□□□□ -0.64
CDKL1-208ENST00000531052 CUX2O14529 1486 aa11.06□□□□□ -0.64
CDKL1-208ENST00000531052 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
CDKL1-208ENST00000531052 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
CDKL1-208ENST00000531052 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
CDKL1-208ENST00000531052 NESP48681 1621 aa11.01□□□□□ -0.65
CDKL1-208ENST00000531052 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
CDKL1-208ENST00000531052 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
CDKL1-208ENST00000531052 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
CDKL1-208ENST00000531052 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
CDKL1-208ENST00000531052 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
CDKL1-208ENST00000531052 WIZO95785 1651 aa10.93□□□□□ -0.66
CDKL1-208ENST00000531052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
CDKL1-208ENST00000531052 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
CDKL1-208ENST00000531052 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
CDKL1-208ENST00000531052 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
CDKL1-208ENST00000531052 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
CDKL1-208ENST00000531052 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
CDKL1-208ENST00000531052 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
CDKL1-208ENST00000531052 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
CDKL1-208ENST00000531052 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
CDKL1-208ENST00000531052 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
CDKL1-208ENST00000531052 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
CDKL1-208ENST00000531052 WDR62O43379 1518 aa10.79□□□□□ -0.68
CDKL1-208ENST00000531052 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
CDKL1-208ENST00000531052 PRDM2Q13029 1718 aa10.77□□□□□ -0.69
CDKL1-208ENST00000531052 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
CDKL1-208ENST00000531052 CFTRP13569 1480 aa10.75□□□□□ -0.69
CDKL1-208ENST00000531052 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
CDKL1-208ENST00000531052 APLP2Q06481 763 aa10.71□□□□□ -0.69
CDKL1-208ENST00000531052 CAPN15O75808 1086 aa10.69□□□□□ -0.7
CDKL1-208ENST00000531052 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
CDKL1-208ENST00000531052 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
CDKL1-208ENST00000531052 ZNF219Q9P2Y4 722 aaPredicted RBP10.65□□□□□ -0.7
CDKL1-208ENST00000531052 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
CDKL1-208ENST00000531052 DSG3P32926 999 aa10.63□□□□□ -0.71
CDKL1-208ENST00000531052 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
CDKL1-208ENST00000531052 ABCB7O75027 752 aa10.55□□□□□ -0.72
CDKL1-208ENST00000531052 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
CDKL1-208ENST00000531052 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
CDKL1-208ENST00000531052 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
CDKL1-208ENST00000531052 POLA2Q14181 598 aa10.53□□□□□ -0.72
CDKL1-208ENST00000531052 ZNF608Q9ULD9 1512 aaPredicted RBP10.51□□□□□ -0.73
CDKL1-208ENST00000531052 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms