RNA–Protein interactions for RNA: ENST00000529434.1

ALKBH3-205, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-205ENST00000529434 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
ALKBH3-205ENST00000529434 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
ALKBH3-205ENST00000529434 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
ALKBH3-205ENST00000529434 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
ALKBH3-205ENST00000529434 FOXD1Q16676 465 aa17.62■□□□□ 0.41
ALKBH3-205ENST00000529434 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
ALKBH3-205ENST00000529434 MSH5O43196 834 aa16.7■□□□□ 0.26
ALKBH3-205ENST00000529434 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
ALKBH3-205ENST00000529434 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
ALKBH3-205ENST00000529434 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
ALKBH3-205ENST00000529434 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
ALKBH3-205ENST00000529434 ADRA2BP18089 450 aa16.16■□□□□ 0.18
ALKBH3-205ENST00000529434 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
ALKBH3-205ENST00000529434 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
ALKBH3-205ENST00000529434 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
ALKBH3-205ENST00000529434 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
ALKBH3-205ENST00000529434 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
ALKBH3-205ENST00000529434 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
ALKBH3-205ENST00000529434 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
ALKBH3-205ENST00000529434 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
ALKBH3-205ENST00000529434 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
ALKBH3-205ENST00000529434 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
ALKBH3-205ENST00000529434 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
ALKBH3-205ENST00000529434 ABCC9O60706 1549 aa14□□□□□ -0.17
ALKBH3-205ENST00000529434 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
ALKBH3-205ENST00000529434 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
ALKBH3-205ENST00000529434 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
ALKBH3-205ENST00000529434 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
ALKBH3-205ENST00000529434 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
ALKBH3-205ENST00000529434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
ALKBH3-205ENST00000529434 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.25
ALKBH3-205ENST00000529434 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
ALKBH3-205ENST00000529434 NACADO15069 1562 aa13.36□□□□□ -0.27
ALKBH3-205ENST00000529434 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
ALKBH3-205ENST00000529434 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
ALKBH3-205ENST00000529434 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
ALKBH3-205ENST00000529434 CAPN15O75808 1086 aa13.21□□□□□ -0.29
ALKBH3-205ENST00000529434 DSG3P32926 999 aa13.16□□□□□ -0.3
ALKBH3-205ENST00000529434 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
ALKBH3-205ENST00000529434 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
ALKBH3-205ENST00000529434 POTEHQ6S545 545 aa13.08□□□□□ -0.32
ALKBH3-205ENST00000529434 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
ALKBH3-205ENST00000529434 APLP2Q06481 763 aa13□□□□□ -0.33
ALKBH3-205ENST00000529434 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
ALKBH3-205ENST00000529434 UNC13AQ9UPW8 1703 aa12.98□□□□□ -0.33
ALKBH3-205ENST00000529434 KCNA4P22459 653 aa12.94□□□□□ -0.34
ALKBH3-205ENST00000529434 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
ALKBH3-205ENST00000529434 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
ALKBH3-205ENST00000529434 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
ALKBH3-205ENST00000529434 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
ALKBH3-205ENST00000529434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
ALKBH3-205ENST00000529434 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
ALKBH3-205ENST00000529434 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
ALKBH3-205ENST00000529434 ABCB7O75027 752 aa12.84□□□□□ -0.35
ALKBH3-205ENST00000529434 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
ALKBH3-205ENST00000529434 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
ALKBH3-205ENST00000529434 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
ALKBH3-205ENST00000529434 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
ALKBH3-205ENST00000529434 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
ALKBH3-205ENST00000529434 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
ALKBH3-205ENST00000529434 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
ALKBH3-205ENST00000529434 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
ALKBH3-205ENST00000529434 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
ALKBH3-205ENST00000529434 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
ALKBH3-205ENST00000529434 WIZO95785 1651 aa12.54□□□□□ -0.4
ALKBH3-205ENST00000529434 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
ALKBH3-205ENST00000529434 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
ALKBH3-205ENST00000529434 POLA2Q14181 598 aa12.48□□□□□ -0.41
ALKBH3-205ENST00000529434 TOP2AP11388 1531 aaKnown RBP12.44□□□□□ -0.42
ALKBH3-205ENST00000529434 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
ALKBH3-205ENST00000529434 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
ALKBH3-205ENST00000529434 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
ALKBH3-205ENST00000529434 CUX2O14529 1486 aa12.34□□□□□ -0.43
ALKBH3-205ENST00000529434 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
ALKBH3-205ENST00000529434 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
ALKBH3-205ENST00000529434 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
ALKBH3-205ENST00000529434 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
ALKBH3-205ENST00000529434 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
ALKBH3-205ENST00000529434 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
ALKBH3-205ENST00000529434 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
ALKBH3-205ENST00000529434 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
ALKBH3-205ENST00000529434 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
ALKBH3-205ENST00000529434 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
ALKBH3-205ENST00000529434 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
ALKBH3-205ENST00000529434 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
ALKBH3-205ENST00000529434 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
ALKBH3-205ENST00000529434 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
ALKBH3-205ENST00000529434 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
ALKBH3-205ENST00000529434 CFTRP13569 1480 aa12.04□□□□□ -0.48
ALKBH3-205ENST00000529434 PRDM2Q13029 1718 aa12□□□□□ -0.49
ALKBH3-205ENST00000529434 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
ALKBH3-205ENST00000529434 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
ALKBH3-205ENST00000529434 CADPSQ9ULU8 1353 aa11.96□□□□□ -0.49
ALKBH3-205ENST00000529434 HAX1O00165 279 aa11.95□□□□□ -0.5
ALKBH3-205ENST00000529434 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
ALKBH3-205ENST00000529434 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
ALKBH3-205ENST00000529434 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
ALKBH3-205ENST00000529434 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
ALKBH3-205ENST00000529434 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
ALKBH3-205ENST00000529434 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms