RNA–Protein interactions for RNA: ENST00000528828.1

NSD3-209, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

TSL 1 (best)

Gene NSD3, Length 1,376 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-209ENST00000528828 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
NSD3-209ENST00000528828 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
NSD3-209ENST00000528828 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
NSD3-209ENST00000528828 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.8
NSD3-209ENST00000528828 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
NSD3-209ENST00000528828 FOXD1Q16676 465 aa18.97■□□□□ 0.63
NSD3-209ENST00000528828 ABCC9O60706 1549 aa18.03■□□□□ 0.48
NSD3-209ENST00000528828 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
NSD3-209ENST00000528828 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
NSD3-209ENST00000528828 MSH5O43196 834 aa17.79■□□□□ 0.44
NSD3-209ENST00000528828 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
NSD3-209ENST00000528828 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
NSD3-209ENST00000528828 ADRA2BP18089 450 aa17.6■□□□□ 0.41
NSD3-209ENST00000528828 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
NSD3-209ENST00000528828 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
NSD3-209ENST00000528828 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
NSD3-209ENST00000528828 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
NSD3-209ENST00000528828 NACADO15069 1562 aa16.93■□□□□ 0.3
NSD3-209ENST00000528828 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
NSD3-209ENST00000528828 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
NSD3-209ENST00000528828 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
NSD3-209ENST00000528828 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
NSD3-209ENST00000528828 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
NSD3-209ENST00000528828 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
NSD3-209ENST00000528828 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
NSD3-209ENST00000528828 SHROOM4Q9ULL8 1493 aa16.28■□□□□ 0.2
NSD3-209ENST00000528828 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
NSD3-209ENST00000528828 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
NSD3-209ENST00000528828 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
NSD3-209ENST00000528828 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
NSD3-209ENST00000528828 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
NSD3-209ENST00000528828 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
NSD3-209ENST00000528828 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
NSD3-209ENST00000528828 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
NSD3-209ENST00000528828 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
NSD3-209ENST00000528828 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
NSD3-209ENST00000528828 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
NSD3-209ENST00000528828 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
NSD3-209ENST00000528828 SMARCA2P51531 1590 aa15.52■□□□□ 0.08
NSD3-209ENST00000528828 ERCC6Q03468 1493 aa15.52■□□□□ 0.07
NSD3-209ENST00000528828 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
NSD3-209ENST00000528828 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
NSD3-209ENST00000528828 NESP48681 1621 aa15.5■□□□□ 0.07
NSD3-209ENST00000528828 CUX2O14529 1486 aa15.48■□□□□ 0.07
NSD3-209ENST00000528828 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
NSD3-209ENST00000528828 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
NSD3-209ENST00000528828 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
NSD3-209ENST00000528828 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
NSD3-209ENST00000528828 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
NSD3-209ENST00000528828 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
NSD3-209ENST00000528828 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
NSD3-209ENST00000528828 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
NSD3-209ENST00000528828 WIZO95785 1651 aa15.23■□□□□ 0.03
NSD3-209ENST00000528828 KIF21AQ7Z4S6 1674 aa15.23■□□□□ 0.03
NSD3-209ENST00000528828 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
NSD3-209ENST00000528828 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
NSD3-209ENST00000528828 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
NSD3-209ENST00000528828 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
NSD3-209ENST00000528828 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
NSD3-209ENST00000528828 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
NSD3-209ENST00000528828 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
NSD3-209ENST00000528828 WDR62O43379 1518 aa15.06■□□□□ 0
NSD3-209ENST00000528828 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
NSD3-209ENST00000528828 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
NSD3-209ENST00000528828 CFTRP13569 1480 aa15□□□□□ -0.01
NSD3-209ENST00000528828 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
NSD3-209ENST00000528828 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
NSD3-209ENST00000528828 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
NSD3-209ENST00000528828 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
NSD3-209ENST00000528828 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
NSD3-209ENST00000528828 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
NSD3-209ENST00000528828 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
NSD3-209ENST00000528828 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
NSD3-209ENST00000528828 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
NSD3-209ENST00000528828 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
NSD3-209ENST00000528828 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
NSD3-209ENST00000528828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
NSD3-209ENST00000528828 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
NSD3-209ENST00000528828 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
NSD3-209ENST00000528828 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.078e-7■■■■■ 30.3
NSD3-209ENST00000528828 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
NSD3-209ENST00000528828 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
NSD3-209ENST00000528828 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
NSD3-209ENST00000528828 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
NSD3-209ENST00000528828 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
NSD3-209ENST00000528828 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
NSD3-209ENST00000528828 KCNA4P22459 653 aa14.59□□□□□ -0.07
NSD3-209ENST00000528828 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
NSD3-209ENST00000528828 ARHGEF11O15085 1522 aa14.57□□□□□ -0.08
NSD3-209ENST00000528828 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
NSD3-209ENST00000528828 CHD1O14646 1710 aa14.52□□□□□ -0.08
NSD3-209ENST00000528828 FBLN2P98095 1184 aa14.52□□□□□ -0.08
NSD3-209ENST00000528828 SOGA1O94964 1423 aa14.52□□□□□ -0.09
NSD3-209ENST00000528828 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
NSD3-209ENST00000528828 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
NSD3-209ENST00000528828 CUX1P39880 1505 aa14.49□□□□□ -0.09
NSD3-209ENST00000528828 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.1
NSD3-209ENST00000528828 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
NSD3-209ENST00000528828 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
NSD3-209ENST00000528828 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms