RNA–Protein interactions for RNA: ENST00000528797.5

YPEL4-204, Transcript of yippee like 4, humanhuman

TSL 1 (best)

Gene YPEL4, Length 1,912 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-204ENST00000528797 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
YPEL4-204ENST00000528797 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
YPEL4-204ENST00000528797 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
YPEL4-204ENST00000528797 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
YPEL4-204ENST00000528797 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
YPEL4-204ENST00000528797 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
YPEL4-204ENST00000528797 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
YPEL4-204ENST00000528797 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
YPEL4-204ENST00000528797 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
YPEL4-204ENST00000528797 ABCC9O60706 1549 aa21.83■■□□□ 1.09
YPEL4-204ENST00000528797 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
YPEL4-204ENST00000528797 NACADO15069 1562 aa21.49■■□□□ 1.03
YPEL4-204ENST00000528797 RSF1Q96T23 1441 aaPredicted RBP21.48■■□□□ 1.03
YPEL4-204ENST00000528797 HRCP23327 699 aa21.37■■□□□ 1.01
YPEL4-204ENST00000528797 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
YPEL4-204ENST00000528797 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
YPEL4-204ENST00000528797 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.98
YPEL4-204ENST00000528797 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
YPEL4-204ENST00000528797 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
YPEL4-204ENST00000528797 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
YPEL4-204ENST00000528797 WIZO95785 1651 aa20.98■□□□□ 0.95
YPEL4-204ENST00000528797 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
YPEL4-204ENST00000528797 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
YPEL4-204ENST00000528797 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
YPEL4-204ENST00000528797 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
YPEL4-204ENST00000528797 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
YPEL4-204ENST00000528797 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
YPEL4-204ENST00000528797 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
YPEL4-204ENST00000528797 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
YPEL4-204ENST00000528797 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
YPEL4-204ENST00000528797 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
YPEL4-204ENST00000528797 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
YPEL4-204ENST00000528797 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
YPEL4-204ENST00000528797 BICRAQ9NZM4 1560 aa20.54■□□□□ 0.88
YPEL4-204ENST00000528797 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
YPEL4-204ENST00000528797 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
YPEL4-204ENST00000528797 EEA1Q15075 1411 aa20.39■□□□□ 0.85
YPEL4-204ENST00000528797 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
YPEL4-204ENST00000528797 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
YPEL4-204ENST00000528797 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
YPEL4-204ENST00000528797 SOGA1O94964 1423 aa20.23■□□□□ 0.83
YPEL4-204ENST00000528797 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
YPEL4-204ENST00000528797 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
YPEL4-204ENST00000528797 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
YPEL4-204ENST00000528797 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
YPEL4-204ENST00000528797 GOLGA3Q08378 1498 aa20.14■□□□□ 0.81
YPEL4-204ENST00000528797 KIF21BO75037 1637 aa20.12■□□□□ 0.81
YPEL4-204ENST00000528797 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
YPEL4-204ENST00000528797 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
YPEL4-204ENST00000528797 BAZ1BQ9UIG0 1483 aaKnown RBP20.07■□□□□ 0.8
YPEL4-204ENST00000528797 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
YPEL4-204ENST00000528797 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
YPEL4-204ENST00000528797 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
YPEL4-204ENST00000528797 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
YPEL4-204ENST00000528797 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
YPEL4-204ENST00000528797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
YPEL4-204ENST00000528797 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
YPEL4-204ENST00000528797 CLIP1P30622 1438 aa19.83■□□□□ 0.76
YPEL4-204ENST00000528797 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
YPEL4-204ENST00000528797 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
YPEL4-204ENST00000528797 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
YPEL4-204ENST00000528797 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
YPEL4-204ENST00000528797 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
YPEL4-204ENST00000528797 PRXQ9BXM0 1461 aa19.71■□□□□ 0.75
YPEL4-204ENST00000528797 PRDM2Q13029 1718 aa19.7■□□□□ 0.74
YPEL4-204ENST00000528797 CUX1P39880 1505 aa19.65■□□□□ 0.74
YPEL4-204ENST00000528797 CFTRP13569 1480 aa19.64■□□□□ 0.74
YPEL4-204ENST00000528797 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
YPEL4-204ENST00000528797 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
YPEL4-204ENST00000528797 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
YPEL4-204ENST00000528797 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
YPEL4-204ENST00000528797 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
YPEL4-204ENST00000528797 APLP2Q06481 763 aa19.54■□□□□ 0.72
YPEL4-204ENST00000528797 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
YPEL4-204ENST00000528797 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
YPEL4-204ENST00000528797 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
YPEL4-204ENST00000528797 CLSPNQ9HAW4 1339 aa19.46■□□□□ 0.71
YPEL4-204ENST00000528797 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
YPEL4-204ENST00000528797 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
YPEL4-204ENST00000528797 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
YPEL4-204ENST00000528797 CUX2O14529 1486 aa19.38■□□□□ 0.69
YPEL4-204ENST00000528797 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
YPEL4-204ENST00000528797 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
YPEL4-204ENST00000528797 MAP3K1Q13233 1512 aa19.37■□□□□ 0.69
YPEL4-204ENST00000528797 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
YPEL4-204ENST00000528797 IGF1RP08069 1367 aa19.31■□□□□ 0.68
YPEL4-204ENST00000528797 DHX57Q6P158 1386 aaKnown RBP19.3■□□□□ 0.68
YPEL4-204ENST00000528797 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
YPEL4-204ENST00000528797 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.67
YPEL4-204ENST00000528797 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
YPEL4-204ENST00000528797 TIAM1Q13009 1591 aa19.24■□□□□ 0.67
YPEL4-204ENST00000528797 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
YPEL4-204ENST00000528797 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.66
YPEL4-204ENST00000528797 CFAP43Q8NDM7 1665 aa19.19■□□□□ 0.66
YPEL4-204ENST00000528797 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
YPEL4-204ENST00000528797 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
YPEL4-204ENST00000528797 FANCD2Q9BXW9 1451 aa19.15■□□□□ 0.66
YPEL4-204ENST00000528797 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
YPEL4-204ENST00000528797 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.65
YPEL4-204ENST00000528797 MIER1Q8N108 512 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms