RNA–Protein interactions for RNA: ENST00000528750.1

PPFIA1-211, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-211ENST00000528750 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
PPFIA1-211ENST00000528750 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
PPFIA1-211ENST00000528750 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
PPFIA1-211ENST00000528750 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
PPFIA1-211ENST00000528750 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
PPFIA1-211ENST00000528750 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
PPFIA1-211ENST00000528750 FOXD1Q16676 465 aa21.52■■□□□ 1.04
PPFIA1-211ENST00000528750 ABCC9O60706 1549 aa20.76■□□□□ 0.91
PPFIA1-211ENST00000528750 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
PPFIA1-211ENST00000528750 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
PPFIA1-211ENST00000528750 ADRA2BP18089 450 aa20.68■□□□□ 0.9
PPFIA1-211ENST00000528750 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
PPFIA1-211ENST00000528750 MSH5O43196 834 aa19.85■□□□□ 0.77
PPFIA1-211ENST00000528750 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
PPFIA1-211ENST00000528750 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
PPFIA1-211ENST00000528750 NACADO15069 1562 aa19.61■□□□□ 0.73
PPFIA1-211ENST00000528750 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
PPFIA1-211ENST00000528750 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
PPFIA1-211ENST00000528750 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
PPFIA1-211ENST00000528750 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
PPFIA1-211ENST00000528750 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
PPFIA1-211ENST00000528750 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
PPFIA1-211ENST00000528750 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
PPFIA1-211ENST00000528750 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
PPFIA1-211ENST00000528750 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
PPFIA1-211ENST00000528750 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
PPFIA1-211ENST00000528750 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
PPFIA1-211ENST00000528750 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
PPFIA1-211ENST00000528750 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
PPFIA1-211ENST00000528750 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
PPFIA1-211ENST00000528750 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
PPFIA1-211ENST00000528750 KCNA4P22459 653 aa18.66■□□□□ 0.58
PPFIA1-211ENST00000528750 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
PPFIA1-211ENST00000528750 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
PPFIA1-211ENST00000528750 DMRT2Q9Y5R5 561 aa18.51■□□□□ 0.55
PPFIA1-211ENST00000528750 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
PPFIA1-211ENST00000528750 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
PPFIA1-211ENST00000528750 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
PPFIA1-211ENST00000528750 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
PPFIA1-211ENST00000528750 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
PPFIA1-211ENST00000528750 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
PPFIA1-211ENST00000528750 CUX2O14529 1486 aa18.02■□□□□ 0.48
PPFIA1-211ENST00000528750 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
PPFIA1-211ENST00000528750 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PPFIA1-211ENST00000528750 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
PPFIA1-211ENST00000528750 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
PPFIA1-211ENST00000528750 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
PPFIA1-211ENST00000528750 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
PPFIA1-211ENST00000528750 NESP48681 1621 aa17.83■□□□□ 0.45
PPFIA1-211ENST00000528750 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
PPFIA1-211ENST00000528750 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
PPFIA1-211ENST00000528750 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
PPFIA1-211ENST00000528750 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
PPFIA1-211ENST00000528750 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
PPFIA1-211ENST00000528750 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
PPFIA1-211ENST00000528750 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
PPFIA1-211ENST00000528750 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
PPFIA1-211ENST00000528750 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
PPFIA1-211ENST00000528750 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
PPFIA1-211ENST00000528750 WIZO95785 1651 aa17.48■□□□□ 0.39
PPFIA1-211ENST00000528750 WDR62O43379 1518 aa17.45■□□□□ 0.38
PPFIA1-211ENST00000528750 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
PPFIA1-211ENST00000528750 CFTRP13569 1480 aa17.31■□□□□ 0.36
PPFIA1-211ENST00000528750 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
PPFIA1-211ENST00000528750 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PPFIA1-211ENST00000528750 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
PPFIA1-211ENST00000528750 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
PPFIA1-211ENST00000528750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■■■■□ 20.2
PPFIA1-211ENST00000528750 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
PPFIA1-211ENST00000528750 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
PPFIA1-211ENST00000528750 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
PPFIA1-211ENST00000528750 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
PPFIA1-211ENST00000528750 ZBTB22O15209 634 aa17.17■□□□□ 0.34
PPFIA1-211ENST00000528750 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
PPFIA1-211ENST00000528750 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
PPFIA1-211ENST00000528750 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
PPFIA1-211ENST00000528750 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
PPFIA1-211ENST00000528750 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
PPFIA1-211ENST00000528750 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
PPFIA1-211ENST00000528750 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
PPFIA1-211ENST00000528750 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
PPFIA1-211ENST00000528750 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
PPFIA1-211ENST00000528750 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
PPFIA1-211ENST00000528750 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
PPFIA1-211ENST00000528750 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
PPFIA1-211ENST00000528750 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
PPFIA1-211ENST00000528750 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
PPFIA1-211ENST00000528750 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
PPFIA1-211ENST00000528750 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
PPFIA1-211ENST00000528750 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
PPFIA1-211ENST00000528750 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
PPFIA1-211ENST00000528750 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PPFIA1-211ENST00000528750 CHD1O14646 1710 aa16.85■□□□□ 0.29
PPFIA1-211ENST00000528750 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
PPFIA1-211ENST00000528750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
PPFIA1-211ENST00000528750 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-211ENST00000528750 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.283e-6■■■■■ 30
PPFIA1-211ENST00000528750 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-211ENST00000528750 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
PPFIA1-211ENST00000528750 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms