RNA–Protein interactions for RNA: ENST00000528020.1

CTSC-205, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 401 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-205ENST00000528020 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
CTSC-205ENST00000528020 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
CTSC-205ENST00000528020 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
CTSC-205ENST00000528020 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
CTSC-205ENST00000528020 FOXD1Q16676 465 aa14.79□□□□□ -0.04
CTSC-205ENST00000528020 NISCHQ9Y2I1 1504 aa14.44□□□□□ -0.1
CTSC-205ENST00000528020 POTEDQ86YR6 584 aa14.27□□□□□ -0.13
CTSC-205ENST00000528020 MSH5O43196 834 aa14.08□□□□□ -0.16
CTSC-205ENST00000528020 PIAS4Q8N2W9 510 aaPredicted RBP13.81□□□□□ -0.2
CTSC-205ENST00000528020 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
CTSC-205ENST00000528020 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
CTSC-205ENST00000528020 ADRA2BP18089 450 aa13.5□□□□□ -0.25
CTSC-205ENST00000528020 ABCC9O60706 1549 aa13.39□□□□□ -0.27
CTSC-205ENST00000528020 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
CTSC-205ENST00000528020 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
CTSC-205ENST00000528020 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
CTSC-205ENST00000528020 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
CTSC-205ENST00000528020 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
CTSC-205ENST00000528020 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
CTSC-205ENST00000528020 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
CTSC-205ENST00000528020 DCAF8L2P0C7V8 631 aa12.41□□□□□ -0.42
CTSC-205ENST00000528020 NACADO15069 1562 aa12.34□□□□□ -0.43
CTSC-205ENST00000528020 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
CTSC-205ENST00000528020 KCNA4P22459 653 aa12.31□□□□□ -0.44
CTSC-205ENST00000528020 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
CTSC-205ENST00000528020 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
CTSC-205ENST00000528020 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
CTSC-205ENST00000528020 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
CTSC-205ENST00000528020 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
CTSC-205ENST00000528020 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
CTSC-205ENST00000528020 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
CTSC-205ENST00000528020 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
CTSC-205ENST00000528020 EHMT2Q96KQ7 1210 aa11.97□□□□□ -0.49
CTSC-205ENST00000528020 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
CTSC-205ENST00000528020 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
CTSC-205ENST00000528020 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
CTSC-205ENST00000528020 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
CTSC-205ENST00000528020 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
CTSC-205ENST00000528020 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
CTSC-205ENST00000528020 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
CTSC-205ENST00000528020 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
CTSC-205ENST00000528020 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
CTSC-205ENST00000528020 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
CTSC-205ENST00000528020 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
CTSC-205ENST00000528020 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
CTSC-205ENST00000528020 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
CTSC-205ENST00000528020 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
CTSC-205ENST00000528020 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
CTSC-205ENST00000528020 CUX2O14529 1486 aa11.5□□□□□ -0.57
CTSC-205ENST00000528020 NESP48681 1621 aa11.45□□□□□ -0.58
CTSC-205ENST00000528020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTSC-205ENST00000528020 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
CTSC-205ENST00000528020 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
CTSC-205ENST00000528020 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
CTSC-205ENST00000528020 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
CTSC-205ENST00000528020 HMGXB3Q12766 1538 aa11.3□□□□□ -0.6
CTSC-205ENST00000528020 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
CTSC-205ENST00000528020 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
CTSC-205ENST00000528020 ZBTB22O15209 634 aa11.29□□□□□ -0.6
CTSC-205ENST00000528020 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
CTSC-205ENST00000528020 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
CTSC-205ENST00000528020 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
CTSC-205ENST00000528020 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
CTSC-205ENST00000528020 BAZ1AQ9NRL2 1556 aaPredicted RBP11.19□□□□□ -0.62
CTSC-205ENST00000528020 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
CTSC-205ENST00000528020 POTEHQ6S545 545 aa11.15□□□□□ -0.62
CTSC-205ENST00000528020 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
CTSC-205ENST00000528020 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
CTSC-205ENST00000528020 CAPN15O75808 1086 aa11.1□□□□□ -0.63
CTSC-205ENST00000528020 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
CTSC-205ENST00000528020 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
CTSC-205ENST00000528020 WDR62O43379 1518 aa11.07□□□□□ -0.64
CTSC-205ENST00000528020 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
CTSC-205ENST00000528020 DSG3P32926 999 aa11.03□□□□□ -0.64
CTSC-205ENST00000528020 WIZO95785 1651 aa11.02□□□□□ -0.64
CTSC-205ENST00000528020 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
CTSC-205ENST00000528020 SPINK5Q9NQ38 1064 aaPredicted RBP11□□□□□ -0.65
CTSC-205ENST00000528020 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
CTSC-205ENST00000528020 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
CTSC-205ENST00000528020 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
CTSC-205ENST00000528020 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
CTSC-205ENST00000528020 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
CTSC-205ENST00000528020 CFTRP13569 1480 aa10.91□□□□□ -0.66
CTSC-205ENST00000528020 APLP2Q06481 763 aa10.89□□□□□ -0.67
CTSC-205ENST00000528020 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
CTSC-205ENST00000528020 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
CTSC-205ENST00000528020 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
CTSC-205ENST00000528020 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
CTSC-205ENST00000528020 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
CTSC-205ENST00000528020 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
CTSC-205ENST00000528020 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
CTSC-205ENST00000528020 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
CTSC-205ENST00000528020 TOP2AP11388 1531 aaKnown RBP10.83□□□□□ -0.68
CTSC-205ENST00000528020 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
CTSC-205ENST00000528020 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
CTSC-205ENST00000528020 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
CTSC-205ENST00000528020 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
CTSC-205ENST00000528020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
CTSC-205ENST00000528020 ABCB7O75027 752 aa10.76□□□□□ -0.69
CTSC-205ENST00000528020 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms