RNA–Protein interactions for RNA: ENST00000527753.5

PHF21A-208, Transcript of PHD finger protein 21A, humanhuman

TSL 2

Gene PHF21A, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-208ENST00000527753 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
PHF21A-208ENST00000527753 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
PHF21A-208ENST00000527753 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
PHF21A-208ENST00000527753 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
PHF21A-208ENST00000527753 FOXD1Q16676 465 aa16.9■□□□□ 0.3
PHF21A-208ENST00000527753 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
PHF21A-208ENST00000527753 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
PHF21A-208ENST00000527753 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
PHF21A-208ENST00000527753 ADRA2BP18089 450 aa15.92■□□□□ 0.14
PHF21A-208ENST00000527753 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
PHF21A-208ENST00000527753 MSH5O43196 834 aa15.75■□□□□ 0.11
PHF21A-208ENST00000527753 POTEDQ86YR6 584 aa15.03■□□□□ -0
PHF21A-208ENST00000527753 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
PHF21A-208ENST00000527753 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
PHF21A-208ENST00000527753 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
PHF21A-208ENST00000527753 ABCC9O60706 1549 aa14.45□□□□□ -0.1
PHF21A-208ENST00000527753 PPP4R3CPQ6ZMV5 832 aa14.43□□□□□ -0.1
PHF21A-208ENST00000527753 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
PHF21A-208ENST00000527753 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
PHF21A-208ENST00000527753 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
PHF21A-208ENST00000527753 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
PHF21A-208ENST00000527753 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
PHF21A-208ENST00000527753 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
PHF21A-208ENST00000527753 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
PHF21A-208ENST00000527753 NACADO15069 1562 aa13.92□□□□□ -0.18
PHF21A-208ENST00000527753 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
PHF21A-208ENST00000527753 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
PHF21A-208ENST00000527753 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
PHF21A-208ENST00000527753 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
PHF21A-208ENST00000527753 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
PHF21A-208ENST00000527753 KCNA4P22459 653 aa13.65□□□□□ -0.22
PHF21A-208ENST00000527753 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
PHF21A-208ENST00000527753 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
PHF21A-208ENST00000527753 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
PHF21A-208ENST00000527753 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
PHF21A-208ENST00000527753 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
PHF21A-208ENST00000527753 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
PHF21A-208ENST00000527753 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
PHF21A-208ENST00000527753 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
PHF21A-208ENST00000527753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
PHF21A-208ENST00000527753 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
PHF21A-208ENST00000527753 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
PHF21A-208ENST00000527753 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
PHF21A-208ENST00000527753 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
PHF21A-208ENST00000527753 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
PHF21A-208ENST00000527753 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
PHF21A-208ENST00000527753 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
PHF21A-208ENST00000527753 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
PHF21A-208ENST00000527753 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
PHF21A-208ENST00000527753 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
PHF21A-208ENST00000527753 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
PHF21A-208ENST00000527753 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
PHF21A-208ENST00000527753 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
PHF21A-208ENST00000527753 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
PHF21A-208ENST00000527753 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
PHF21A-208ENST00000527753 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
PHF21A-208ENST00000527753 CAPN15O75808 1086 aa12.79□□□□□ -0.36
PHF21A-208ENST00000527753 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
PHF21A-208ENST00000527753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
PHF21A-208ENST00000527753 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
PHF21A-208ENST00000527753 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
PHF21A-208ENST00000527753 APLP2Q06481 763 aa12.73□□□□□ -0.37
PHF21A-208ENST00000527753 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
PHF21A-208ENST00000527753 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
PHF21A-208ENST00000527753 WIZO95785 1651 aa12.69□□□□□ -0.38
PHF21A-208ENST00000527753 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
PHF21A-208ENST00000527753 DSG3P32926 999 aa12.67□□□□□ -0.38
PHF21A-208ENST00000527753 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
PHF21A-208ENST00000527753 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
PHF21A-208ENST00000527753 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
PHF21A-208ENST00000527753 TOP2AP11388 1531 aaKnown RBP12.6□□□□□ -0.39
PHF21A-208ENST00000527753 ZBTB22O15209 634 aa12.55□□□□□ -0.4
PHF21A-208ENST00000527753 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
PHF21A-208ENST00000527753 ABCB7O75027 752 aa12.52□□□□□ -0.41
PHF21A-208ENST00000527753 NESP48681 1621 aa12.51□□□□□ -0.41
PHF21A-208ENST00000527753 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
PHF21A-208ENST00000527753 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
PHF21A-208ENST00000527753 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
PHF21A-208ENST00000527753 CFTRP13569 1480 aa12.46□□□□□ -0.42
PHF21A-208ENST00000527753 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
PHF21A-208ENST00000527753 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
PHF21A-208ENST00000527753 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
PHF21A-208ENST00000527753 POLA2Q14181 598 aa12.34□□□□□ -0.43
PHF21A-208ENST00000527753 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
PHF21A-208ENST00000527753 CUX2O14529 1486 aa12.28□□□□□ -0.44
PHF21A-208ENST00000527753 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
PHF21A-208ENST00000527753 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
PHF21A-208ENST00000527753 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
PHF21A-208ENST00000527753 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
PHF21A-208ENST00000527753 WDR62O43379 1518 aa12.21□□□□□ -0.45
PHF21A-208ENST00000527753 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
PHF21A-208ENST00000527753 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
PHF21A-208ENST00000527753 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
PHF21A-208ENST00000527753 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
PHF21A-208ENST00000527753 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
PHF21A-208ENST00000527753 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
PHF21A-208ENST00000527753 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
PHF21A-208ENST00000527753 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
PHF21A-208ENST00000527753 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
PHF21A-208ENST00000527753 CUX1P39880 1505 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms