RNA–Protein interactions for RNA: ENST00000527370.5

PITPNM1-209, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

TSL 2

Gene PITPNM1, Length 3,712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-209ENST00000527370 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
PITPNM1-209ENST00000527370 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
PITPNM1-209ENST00000527370 ABCC9O60706 1549 aa18.52■□□□□ 0.56
PITPNM1-209ENST00000527370 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
PITPNM1-209ENST00000527370 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
PITPNM1-209ENST00000527370 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
PITPNM1-209ENST00000527370 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
PITPNM1-209ENST00000527370 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
PITPNM1-209ENST00000527370 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
PITPNM1-209ENST00000527370 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
PITPNM1-209ENST00000527370 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
PITPNM1-209ENST00000527370 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
PITPNM1-209ENST00000527370 HRCP23327 699 aa17.08■□□□□ 0.33
PITPNM1-209ENST00000527370 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
PITPNM1-209ENST00000527370 NACADO15069 1562 aa16.99■□□□□ 0.31
PITPNM1-209ENST00000527370 MYT1Q01538 1121 aa16.87■□□□□ 0.29
PITPNM1-209ENST00000527370 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PITPNM1-209ENST00000527370 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.29
PITPNM1-209ENST00000527370 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
PITPNM1-209ENST00000527370 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
PITPNM1-209ENST00000527370 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
PITPNM1-209ENST00000527370 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
PITPNM1-209ENST00000527370 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
PITPNM1-209ENST00000527370 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
PITPNM1-209ENST00000527370 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
PITPNM1-209ENST00000527370 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
PITPNM1-209ENST00000527370 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
PITPNM1-209ENST00000527370 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
PITPNM1-209ENST00000527370 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
PITPNM1-209ENST00000527370 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
PITPNM1-209ENST00000527370 FBLN2P98095 1184 aa16.2■□□□□ 0.18
PITPNM1-209ENST00000527370 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
PITPNM1-209ENST00000527370 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
PITPNM1-209ENST00000527370 WIZO95785 1651 aa16.17■□□□□ 0.18
PITPNM1-209ENST00000527370 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
PITPNM1-209ENST00000527370 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
PITPNM1-209ENST00000527370 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
PITPNM1-209ENST00000527370 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
PITPNM1-209ENST00000527370 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
PITPNM1-209ENST00000527370 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
PITPNM1-209ENST00000527370 GTF3C3Q9Y5Q9 886 aa16.05■□□□□ 0.16
PITPNM1-209ENST00000527370 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
PITPNM1-209ENST00000527370 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
PITPNM1-209ENST00000527370 SMARCA4P51532 1647 aa16■□□□□ 0.15
PITPNM1-209ENST00000527370 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
PITPNM1-209ENST00000527370 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
PITPNM1-209ENST00000527370 CENPBP07199 599 aaPredicted RBP15.97■□□□□ 0.15
PITPNM1-209ENST00000527370 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
PITPNM1-209ENST00000527370 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
PITPNM1-209ENST00000527370 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
PITPNM1-209ENST00000527370 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
PITPNM1-209ENST00000527370 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
PITPNM1-209ENST00000527370 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.13
PITPNM1-209ENST00000527370 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
PITPNM1-209ENST00000527370 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
PITPNM1-209ENST00000527370 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
PITPNM1-209ENST00000527370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
PITPNM1-209ENST00000527370 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
PITPNM1-209ENST00000527370 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.11
PITPNM1-209ENST00000527370 NESP48681 1621 aa15.77■□□□□ 0.11
PITPNM1-209ENST00000527370 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
PITPNM1-209ENST00000527370 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
PITPNM1-209ENST00000527370 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
PITPNM1-209ENST00000527370 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
PITPNM1-209ENST00000527370 APLP2Q06481 763 aa15.67■□□□□ 0.1
PITPNM1-209ENST00000527370 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
PITPNM1-209ENST00000527370 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
PITPNM1-209ENST00000527370 SOGA1O94964 1423 aa15.63■□□□□ 0.09
PITPNM1-209ENST00000527370 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
PITPNM1-209ENST00000527370 FANCD2Q9BXW9 1451 aa15.56■□□□□ 0.08
PITPNM1-209ENST00000527370 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
PITPNM1-209ENST00000527370 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
PITPNM1-209ENST00000527370 P3H3Q8IVL6 736 aa15.52■□□□□ 0.07
PITPNM1-209ENST00000527370 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
PITPNM1-209ENST00000527370 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
PITPNM1-209ENST00000527370 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
PITPNM1-209ENST00000527370 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
PITPNM1-209ENST00000527370 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
PITPNM1-209ENST00000527370 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
PITPNM1-209ENST00000527370 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
PITPNM1-209ENST00000527370 MYT1LQ9UL68 1186 aa15.39■□□□□ 0.05
PITPNM1-209ENST00000527370 PRKCSHP14314 528 aaPredicted RBP15.38■□□□□ 0.05
PITPNM1-209ENST00000527370 ITGAEP38570 1179 aa15.35■□□□□ 0.05
PITPNM1-209ENST00000527370 CUX2O14529 1486 aa15.35■□□□□ 0.05
PITPNM1-209ENST00000527370 CFTRP13569 1480 aa15.33■□□□□ 0.04
PITPNM1-209ENST00000527370 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
PITPNM1-209ENST00000527370 SYNJ1O43426 1573 aa15.33■□□□□ 0.04
PITPNM1-209ENST00000527370 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
PITPNM1-209ENST00000527370 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
PITPNM1-209ENST00000527370 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.048e-7■■■□□ 15
PITPNM1-209ENST00000527370 EEA1Q15075 1411 aa15.29■□□□□ 0.04
PITPNM1-209ENST00000527370 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
PITPNM1-209ENST00000527370 GOLGA3Q08378 1498 aa15.28■□□□□ 0.04
PITPNM1-209ENST00000527370 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
PITPNM1-209ENST00000527370 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
PITPNM1-209ENST00000527370 MIER1Q8N108 512 aa15.26■□□□□ 0.03
PITPNM1-209ENST00000527370 BCANQ96GW7 911 aa15.26■□□□□ 0.03
PITPNM1-209ENST00000527370 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
PITPNM1-209ENST00000527370 CLIP1P30622 1438 aa15.24■□□□□ 0.03
PITPNM1-209ENST00000527370 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms