RNA–Protein interactions for RNA: ENST00000527136.1

SIGIRR-208, Transcript of single Ig and TIR domain containing, humanhuman

TSL 4

Gene SIGIRR, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-208ENST00000527136 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
SIGIRR-208ENST00000527136 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
SIGIRR-208ENST00000527136 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
SIGIRR-208ENST00000527136 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
SIGIRR-208ENST00000527136 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
SIGIRR-208ENST00000527136 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
SIGIRR-208ENST00000527136 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
SIGIRR-208ENST00000527136 FOXD1Q16676 465 aa22.07■■□□□ 1.12
SIGIRR-208ENST00000527136 ADRA2BP18089 450 aa21.83■■□□□ 1.09
SIGIRR-208ENST00000527136 ABCC9O60706 1549 aa21.8■■□□□ 1.08
SIGIRR-208ENST00000527136 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
SIGIRR-208ENST00000527136 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
SIGIRR-208ENST00000527136 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
SIGIRR-208ENST00000527136 PIAS4Q8N2W9 510 aaPredicted RBP21.08■□□□□ 0.97
SIGIRR-208ENST00000527136 NACADO15069 1562 aa20.97■□□□□ 0.95
SIGIRR-208ENST00000527136 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
SIGIRR-208ENST00000527136 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
SIGIRR-208ENST00000527136 KCNA4P22459 653 aa20.9■□□□□ 0.94
SIGIRR-208ENST00000527136 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
SIGIRR-208ENST00000527136 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
SIGIRR-208ENST00000527136 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
SIGIRR-208ENST00000527136 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
SIGIRR-208ENST00000527136 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
SIGIRR-208ENST00000527136 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
SIGIRR-208ENST00000527136 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.84
SIGIRR-208ENST00000527136 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
SIGIRR-208ENST00000527136 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
SIGIRR-208ENST00000527136 MSH5O43196 834 aa20.12■□□□□ 0.81
SIGIRR-208ENST00000527136 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
SIGIRR-208ENST00000527136 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
SIGIRR-208ENST00000527136 NPM3O75607 178 aaKnown RBP19.95■□□□□ 0.78
SIGIRR-208ENST00000527136 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
SIGIRR-208ENST00000527136 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
SIGIRR-208ENST00000527136 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
SIGIRR-208ENST00000527136 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
SIGIRR-208ENST00000527136 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
SIGIRR-208ENST00000527136 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
SIGIRR-208ENST00000527136 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
SIGIRR-208ENST00000527136 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
SIGIRR-208ENST00000527136 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
SIGIRR-208ENST00000527136 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
SIGIRR-208ENST00000527136 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
SIGIRR-208ENST00000527136 MAPK8IP2Q13387 824 aaPredicted RBP19.58■□□□□ 0.72
SIGIRR-208ENST00000527136 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.72
SIGIRR-208ENST00000527136 WIZO95785 1651 aa19.45■□□□□ 0.7
SIGIRR-208ENST00000527136 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
SIGIRR-208ENST00000527136 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
SIGIRR-208ENST00000527136 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
SIGIRR-208ENST00000527136 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
SIGIRR-208ENST00000527136 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
SIGIRR-208ENST00000527136 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
SIGIRR-208ENST00000527136 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SIGIRR-208ENST00000527136 ZBTB22O15209 634 aa19.21■□□□□ 0.67
SIGIRR-208ENST00000527136 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
SIGIRR-208ENST00000527136 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
SIGIRR-208ENST00000527136 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
SIGIRR-208ENST00000527136 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
SIGIRR-208ENST00000527136 NESP48681 1621 aa18.94■□□□□ 0.62
SIGIRR-208ENST00000527136 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
SIGIRR-208ENST00000527136 CFTRP13569 1480 aa18.84■□□□□ 0.61
SIGIRR-208ENST00000527136 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
SIGIRR-208ENST00000527136 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
SIGIRR-208ENST00000527136 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
SIGIRR-208ENST00000527136 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
SIGIRR-208ENST00000527136 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
SIGIRR-208ENST00000527136 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
SIGIRR-208ENST00000527136 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
SIGIRR-208ENST00000527136 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
SIGIRR-208ENST00000527136 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
SIGIRR-208ENST00000527136 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
SIGIRR-208ENST00000527136 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
SIGIRR-208ENST00000527136 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
SIGIRR-208ENST00000527136 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
SIGIRR-208ENST00000527136 MYCNP04198 464 aaPredicted RBP18.45■□□□□ 0.54
SIGIRR-208ENST00000527136 CUX1P39880 1505 aa18.43■□□□□ 0.54
SIGIRR-208ENST00000527136 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
SIGIRR-208ENST00000527136 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
SIGIRR-208ENST00000527136 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
SIGIRR-208ENST00000527136 WDR62O43379 1518 aa18.39■□□□□ 0.53
SIGIRR-208ENST00000527136 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
SIGIRR-208ENST00000527136 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
SIGIRR-208ENST00000527136 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
SIGIRR-208ENST00000527136 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
SIGIRR-208ENST00000527136 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
SIGIRR-208ENST00000527136 SOGA1O94964 1423 aa18.3■□□□□ 0.52
SIGIRR-208ENST00000527136 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
SIGIRR-208ENST00000527136 CUX2O14529 1486 aa18.27■□□□□ 0.52
SIGIRR-208ENST00000527136 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
SIGIRR-208ENST00000527136 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
SIGIRR-208ENST00000527136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
SIGIRR-208ENST00000527136 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
SIGIRR-208ENST00000527136 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
SIGIRR-208ENST00000527136 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
SIGIRR-208ENST00000527136 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
SIGIRR-208ENST00000527136 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.5
SIGIRR-208ENST00000527136 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
SIGIRR-208ENST00000527136 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
SIGIRR-208ENST00000527136 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
SIGIRR-208ENST00000527136 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
SIGIRR-208ENST00000527136 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms