RNA–Protein interactions for RNA: ENST00000526677.1

MS4A6A-205, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 2,416 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-205ENST00000526677 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
MS4A6A-205ENST00000526677 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
MS4A6A-205ENST00000526677 HRCP23327 699 aa16.42■□□□□ 0.22
MS4A6A-205ENST00000526677 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
MS4A6A-205ENST00000526677 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
MS4A6A-205ENST00000526677 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
MS4A6A-205ENST00000526677 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
MS4A6A-205ENST00000526677 CCDC180Q9P1Z9 1646 aa16.09■□□□□ 0.17
MS4A6A-205ENST00000526677 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
MS4A6A-205ENST00000526677 DCAF1Q9Y4B6 1507 aa15.97■□□□□ 0.15
MS4A6A-205ENST00000526677 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
MS4A6A-205ENST00000526677 ABCC9O60706 1549 aa15.8■□□□□ 0.12
MS4A6A-205ENST00000526677 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
MS4A6A-205ENST00000526677 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
MS4A6A-205ENST00000526677 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
MS4A6A-205ENST00000526677 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.09
MS4A6A-205ENST00000526677 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
MS4A6A-205ENST00000526677 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
MS4A6A-205ENST00000526677 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
MS4A6A-205ENST00000526677 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
MS4A6A-205ENST00000526677 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
MS4A6A-205ENST00000526677 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
MS4A6A-205ENST00000526677 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
MS4A6A-205ENST00000526677 ACIN1Q9UKV3 1341 aaKnown RBP15.09■□□□□ 0.01
MS4A6A-205ENST00000526677 SCRIBQ14160 1630 aa15.08■□□□□ 0
MS4A6A-205ENST00000526677 NACADO15069 1562 aa15.04■□□□□ -0
MS4A6A-205ENST00000526677 NEUROD1Q13562 356 aa15.02■□□□□ -0
MS4A6A-205ENST00000526677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
MS4A6A-205ENST00000526677 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
MS4A6A-205ENST00000526677 MYT1Q01538 1121 aa14.94□□□□□ -0.02
MS4A6A-205ENST00000526677 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
MS4A6A-205ENST00000526677 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
MS4A6A-205ENST00000526677 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
MS4A6A-205ENST00000526677 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
MS4A6A-205ENST00000526677 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
MS4A6A-205ENST00000526677 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
MS4A6A-205ENST00000526677 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
MS4A6A-205ENST00000526677 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
MS4A6A-205ENST00000526677 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
MS4A6A-205ENST00000526677 WIZO95785 1651 aa14.83□□□□□ -0.04
MS4A6A-205ENST00000526677 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
MS4A6A-205ENST00000526677 ZNF316A6NFI3 1004 aaPredicted RBP14.7□□□□□ -0.06
MS4A6A-205ENST00000526677 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
MS4A6A-205ENST00000526677 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
MS4A6A-205ENST00000526677 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
MS4A6A-205ENST00000526677 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
MS4A6A-205ENST00000526677 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
MS4A6A-205ENST00000526677 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
MS4A6A-205ENST00000526677 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
MS4A6A-205ENST00000526677 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
MS4A6A-205ENST00000526677 EEA1Q15075 1411 aa14.59□□□□□ -0.07
MS4A6A-205ENST00000526677 SOGA1O94964 1423 aa14.57□□□□□ -0.08
MS4A6A-205ENST00000526677 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
MS4A6A-205ENST00000526677 MIER1Q8N108 512 aa14.54□□□□□ -0.08
MS4A6A-205ENST00000526677 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
MS4A6A-205ENST00000526677 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.08
MS4A6A-205ENST00000526677 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
MS4A6A-205ENST00000526677 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
MS4A6A-205ENST00000526677 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
MS4A6A-205ENST00000526677 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
MS4A6A-205ENST00000526677 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
MS4A6A-205ENST00000526677 KIF21BO75037 1637 aa14.39□□□□□ -0.11
MS4A6A-205ENST00000526677 CLSPNQ9HAW4 1339 aa14.38□□□□□ -0.11
MS4A6A-205ENST00000526677 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
MS4A6A-205ENST00000526677 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
MS4A6A-205ENST00000526677 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
MS4A6A-205ENST00000526677 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
MS4A6A-205ENST00000526677 CLIP1P30622 1438 aa14.33□□□□□ -0.12
MS4A6A-205ENST00000526677 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
MS4A6A-205ENST00000526677 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.12
MS4A6A-205ENST00000526677 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
MS4A6A-205ENST00000526677 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
MS4A6A-205ENST00000526677 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
MS4A6A-205ENST00000526677 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
MS4A6A-205ENST00000526677 APLP2Q06481 763 aa14.2□□□□□ -0.14
MS4A6A-205ENST00000526677 TSHZ2Q9NRE2 1034 aa14.16□□□□□ -0.14
MS4A6A-205ENST00000526677 CUX2O14529 1486 aa14.12□□□□□ -0.15
MS4A6A-205ENST00000526677 ANP32EQ9BTT0 268 aa14.1□□□□□ -0.15
MS4A6A-205ENST00000526677 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
MS4A6A-205ENST00000526677 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.15
MS4A6A-205ENST00000526677 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
MS4A6A-205ENST00000526677 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
MS4A6A-205ENST00000526677 ARAP1Q96P48 1450 aa14.07□□□□□ -0.16
MS4A6A-205ENST00000526677 PRXQ9BXM0 1461 aa14.05□□□□□ -0.16
MS4A6A-205ENST00000526677 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
MS4A6A-205ENST00000526677 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
MS4A6A-205ENST00000526677 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
MS4A6A-205ENST00000526677 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
MS4A6A-205ENST00000526677 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
MS4A6A-205ENST00000526677 RANGAP1P46060 587 aaPredicted RBP13.98□□□□□ -0.17
MS4A6A-205ENST00000526677 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
MS4A6A-205ENST00000526677 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
MS4A6A-205ENST00000526677 MAPKBP1O60336 1514 aa13.96□□□□□ -0.18
MS4A6A-205ENST00000526677 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
MS4A6A-205ENST00000526677 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
MS4A6A-205ENST00000526677 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
MS4A6A-205ENST00000526677 FKBP8Q14318 412 aa13.88□□□□□ -0.19
MS4A6A-205ENST00000526677 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
MS4A6A-205ENST00000526677 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
MS4A6A-205ENST00000526677 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms