RNA–Protein interactions for RNA: ENST00000526128.1

PUM1-217, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-217ENST00000526128 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
PUM1-217ENST00000526128 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
PUM1-217ENST00000526128 SENP3Q9H4L4 574 aaPredicted RBP14.83□□□□□ -0.04
PUM1-217ENST00000526128 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
PUM1-217ENST00000526128 FOXD1Q16676 465 aa13.9□□□□□ -0.18
PUM1-217ENST00000526128 NISCHQ9Y2I1 1504 aa13.49□□□□□ -0.25
PUM1-217ENST00000526128 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
PUM1-217ENST00000526128 MSH5O43196 834 aa13.1□□□□□ -0.31
PUM1-217ENST00000526128 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
PUM1-217ENST00000526128 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
PUM1-217ENST00000526128 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
PUM1-217ENST00000526128 ADRA2BP18089 450 aa12.67□□□□□ -0.38
PUM1-217ENST00000526128 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
PUM1-217ENST00000526128 ABCC9O60706 1549 aa11.99□□□□□ -0.49
PUM1-217ENST00000526128 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
PUM1-217ENST00000526128 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
PUM1-217ENST00000526128 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
PUM1-217ENST00000526128 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
PUM1-217ENST00000526128 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
PUM1-217ENST00000526128 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
PUM1-217ENST00000526128 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
PUM1-217ENST00000526128 NACADO15069 1562 aa11.34□□□□□ -0.59
PUM1-217ENST00000526128 KCNA4P22459 653 aa11.28□□□□□ -0.6
PUM1-217ENST00000526128 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
PUM1-217ENST00000526128 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
PUM1-217ENST00000526128 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
PUM1-217ENST00000526128 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
PUM1-217ENST00000526128 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
PUM1-217ENST00000526128 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
PUM1-217ENST00000526128 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.63
PUM1-217ENST00000526128 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
PUM1-217ENST00000526128 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
PUM1-217ENST00000526128 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
PUM1-217ENST00000526128 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
PUM1-217ENST00000526128 SCRIBQ14160 1630 aa11.02□□□□□ -0.65
PUM1-217ENST00000526128 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
PUM1-217ENST00000526128 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
PUM1-217ENST00000526128 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
PUM1-217ENST00000526128 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
PUM1-217ENST00000526128 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
PUM1-217ENST00000526128 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
PUM1-217ENST00000526128 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
PUM1-217ENST00000526128 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
PUM1-217ENST00000526128 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
PUM1-217ENST00000526128 NPM3O75607 178 aaKnown RBP10.72□□□□□ -0.69
PUM1-217ENST00000526128 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
PUM1-217ENST00000526128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
PUM1-217ENST00000526128 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
PUM1-217ENST00000526128 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
PUM1-217ENST00000526128 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
PUM1-217ENST00000526128 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
PUM1-217ENST00000526128 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
PUM1-217ENST00000526128 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
PUM1-217ENST00000526128 POTEHQ6S545 545 aa10.44□□□□□ -0.74
PUM1-217ENST00000526128 MROH2BQ7Z745 1585 aa10.41□□□□□ -0.74
PUM1-217ENST00000526128 HMGXB3Q12766 1538 aa10.39□□□□□ -0.75
PUM1-217ENST00000526128 BAZ1BQ9UIG0 1483 aaKnown RBP10.39□□□□□ -0.75
PUM1-217ENST00000526128 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
PUM1-217ENST00000526128 CUX2O14529 1486 aa10.36□□□□□ -0.75
PUM1-217ENST00000526128 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
PUM1-217ENST00000526128 ZBTB22O15209 634 aa10.34□□□□□ -0.75
PUM1-217ENST00000526128 DSG3P32926 999 aa10.34□□□□□ -0.75
PUM1-217ENST00000526128 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
PUM1-217ENST00000526128 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
PUM1-217ENST00000526128 NESP48681 1621 aa10.33□□□□□ -0.76
PUM1-217ENST00000526128 CAPN15O75808 1086 aa10.31□□□□□ -0.76
PUM1-217ENST00000526128 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
PUM1-217ENST00000526128 WIZO95785 1651 aa10.29□□□□□ -0.76
PUM1-217ENST00000526128 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
PUM1-217ENST00000526128 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
PUM1-217ENST00000526128 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
PUM1-217ENST00000526128 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
PUM1-217ENST00000526128 THOC2Q8NI27 1593 aaKnown RBP10.18□□□□□ -0.78
PUM1-217ENST00000526128 PDS5BQ9NTI5 1447 aa10.18□□□□□ -0.78
PUM1-217ENST00000526128 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
PUM1-217ENST00000526128 TOP2AP11388 1531 aaKnown RBP10.14□□□□□ -0.79
PUM1-217ENST00000526128 MYT1Q01538 1121 aa10.09□□□□□ -0.79
PUM1-217ENST00000526128 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
PUM1-217ENST00000526128 CFTRP13569 1480 aa10.08□□□□□ -0.8
PUM1-217ENST00000526128 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
PUM1-217ENST00000526128 MRC2Q9UBG0 1479 aa10.08□□□□□ -0.8
PUM1-217ENST00000526128 CEP164Q9UPV0 1460 aa10.07□□□□□ -0.8
PUM1-217ENST00000526128 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
PUM1-217ENST00000526128 CCDC88BA6NC98 1476 aa10.06□□□□□ -0.8
PUM1-217ENST00000526128 ABCB7O75027 752 aa10.06□□□□□ -0.8
PUM1-217ENST00000526128 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
PUM1-217ENST00000526128 WDR62O43379 1518 aa10.03□□□□□ -0.8
PUM1-217ENST00000526128 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
PUM1-217ENST00000526128 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
PUM1-217ENST00000526128 APLP2Q06481 763 aa9.98□□□□□ -0.81
PUM1-217ENST00000526128 PRDM2Q13029 1718 aa9.96□□□□□ -0.81
PUM1-217ENST00000526128 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
PUM1-217ENST00000526128 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
PUM1-217ENST00000526128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.82
PUM1-217ENST00000526128 HNRNPUL2Q1KMD3 747 aaKnown RBP9.9□□□□□ -0.82
PUM1-217ENST00000526128 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
PUM1-217ENST00000526128 TOPBP1Q92547 1522 aa9.9□□□□□ -0.82
PUM1-217ENST00000526128 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
PUM1-217ENST00000526128 ZNF608Q9ULD9 1512 aaPredicted RBP9.86□□□□□ -0.83
PUM1-217ENST00000526128 ABCC8Q09428 1581 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms