RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
CLNS1A-205ENST00000526009 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
CLNS1A-205ENST00000526009 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
CLNS1A-205ENST00000526009 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
CLNS1A-205ENST00000526009 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
CLNS1A-205ENST00000526009 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
CLNS1A-205ENST00000526009 FOXD1Q16676 465 aa18.59■□□□□ 0.57
CLNS1A-205ENST00000526009 ADRA2BP18089 450 aa17.97■□□□□ 0.47
CLNS1A-205ENST00000526009 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
CLNS1A-205ENST00000526009 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
CLNS1A-205ENST00000526009 ABCC9O60706 1549 aa17.45■□□□□ 0.38
CLNS1A-205ENST00000526009 MSH5O43196 834 aa17.33■□□□□ 0.36
CLNS1A-205ENST00000526009 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
CLNS1A-205ENST00000526009 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
CLNS1A-205ENST00000526009 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
CLNS1A-205ENST00000526009 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
CLNS1A-205ENST00000526009 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-205ENST00000526009 KCNA4P22459 653 aa16.3■□□□□ 0.2
CLNS1A-205ENST00000526009 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
CLNS1A-205ENST00000526009 NACADO15069 1562 aa16.26■□□□□ 0.19
CLNS1A-205ENST00000526009 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLNS1A-205ENST00000526009 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
CLNS1A-205ENST00000526009 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
CLNS1A-205ENST00000526009 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
CLNS1A-205ENST00000526009 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
CLNS1A-205ENST00000526009 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
CLNS1A-205ENST00000526009 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
CLNS1A-205ENST00000526009 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.14
CLNS1A-205ENST00000526009 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-205ENST00000526009 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
CLNS1A-205ENST00000526009 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
CLNS1A-205ENST00000526009 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
CLNS1A-205ENST00000526009 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
CLNS1A-205ENST00000526009 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
CLNS1A-205ENST00000526009 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
CLNS1A-205ENST00000526009 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
CLNS1A-205ENST00000526009 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
CLNS1A-205ENST00000526009 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
CLNS1A-205ENST00000526009 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
CLNS1A-205ENST00000526009 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
CLNS1A-205ENST00000526009 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
CLNS1A-205ENST00000526009 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
CLNS1A-205ENST00000526009 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
CLNS1A-205ENST00000526009 CUX2O14529 1486 aa15.16■□□□□ 0.02
CLNS1A-205ENST00000526009 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
CLNS1A-205ENST00000526009 NCAPD3P42695 1498 aa15.05■□□□□ -0
CLNS1A-205ENST00000526009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -03e-7■■■□□ 17.5
CLNS1A-205ENST00000526009 SLC4A2P04920 1241 aa15.02■□□□□ -0
CLNS1A-205ENST00000526009 ZBTB22O15209 634 aa14.97□□□□□ -0.01
CLNS1A-205ENST00000526009 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
CLNS1A-205ENST00000526009 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
CLNS1A-205ENST00000526009 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
CLNS1A-205ENST00000526009 NESP48681 1621 aa14.88□□□□□ -0.03
CLNS1A-205ENST00000526009 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
CLNS1A-205ENST00000526009 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
CLNS1A-205ENST00000526009 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CLNS1A-205ENST00000526009 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
CLNS1A-205ENST00000526009 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
CLNS1A-205ENST00000526009 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CLNS1A-205ENST00000526009 THOC2Q8NI27 1593 aaKnown RBP14.75□□□□□ -0.05
CLNS1A-205ENST00000526009 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
CLNS1A-205ENST00000526009 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
CLNS1A-205ENST00000526009 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
CLNS1A-205ENST00000526009 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
CLNS1A-205ENST00000526009 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
CLNS1A-205ENST00000526009 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
CLNS1A-205ENST00000526009 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
CLNS1A-205ENST00000526009 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
CLNS1A-205ENST00000526009 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
CLNS1A-205ENST00000526009 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
CLNS1A-205ENST00000526009 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
CLNS1A-205ENST00000526009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
CLNS1A-205ENST00000526009 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
CLNS1A-205ENST00000526009 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
CLNS1A-205ENST00000526009 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
CLNS1A-205ENST00000526009 WDR62O43379 1518 aa14.51□□□□□ -0.09
CLNS1A-205ENST00000526009 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
CLNS1A-205ENST00000526009 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
CLNS1A-205ENST00000526009 APLP2Q06481 763 aa14.41□□□□□ -0.1
CLNS1A-205ENST00000526009 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
CLNS1A-205ENST00000526009 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
CLNS1A-205ENST00000526009 WIZO95785 1651 aa14.37□□□□□ -0.11
CLNS1A-205ENST00000526009 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
CLNS1A-205ENST00000526009 CFTRP13569 1480 aa14.33□□□□□ -0.12
CLNS1A-205ENST00000526009 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
CLNS1A-205ENST00000526009 CAPN15O75808 1086 aa14.31□□□□□ -0.12
CLNS1A-205ENST00000526009 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
CLNS1A-205ENST00000526009 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
CLNS1A-205ENST00000526009 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
CLNS1A-205ENST00000526009 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
CLNS1A-205ENST00000526009 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
CLNS1A-205ENST00000526009 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
CLNS1A-205ENST00000526009 RSF1Q96T23 1441 aaPredicted RBP14.19□□□□□ -0.14
CLNS1A-205ENST00000526009 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
CLNS1A-205ENST00000526009 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
CLNS1A-205ENST00000526009 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
CLNS1A-205ENST00000526009 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
CLNS1A-205ENST00000526009 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
CLNS1A-205ENST00000526009 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
CLNS1A-205ENST00000526009 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms