RNA–Protein interactions for RNA: ENST00000525973.5

NCAM1-206, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-206ENST00000525973 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
NCAM1-206ENST00000525973 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
NCAM1-206ENST00000525973 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
NCAM1-206ENST00000525973 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
NCAM1-206ENST00000525973 FOXD1Q16676 465 aa18.36■□□□□ 0.53
NCAM1-206ENST00000525973 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
NCAM1-206ENST00000525973 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
NCAM1-206ENST00000525973 ADRA2BP18089 450 aa17.23■□□□□ 0.35
NCAM1-206ENST00000525973 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
NCAM1-206ENST00000525973 MSH5O43196 834 aa17.11■□□□□ 0.33
NCAM1-206ENST00000525973 NISCHQ9Y2I1 1504 aa16.49■□□□□ 0.23
NCAM1-206ENST00000525973 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
NCAM1-206ENST00000525973 ABCC9O60706 1549 aa16.01■□□□□ 0.15
NCAM1-206ENST00000525973 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
NCAM1-206ENST00000525973 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
NCAM1-206ENST00000525973 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
NCAM1-206ENST00000525973 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
NCAM1-206ENST00000525973 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
NCAM1-206ENST00000525973 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
NCAM1-206ENST00000525973 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
NCAM1-206ENST00000525973 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
NCAM1-206ENST00000525973 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
NCAM1-206ENST00000525973 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
NCAM1-206ENST00000525973 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
NCAM1-206ENST00000525973 DNAJC5Q9H3Z4 198 aa14.89□□□□□ -0.03
NCAM1-206ENST00000525973 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
NCAM1-206ENST00000525973 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
NCAM1-206ENST00000525973 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
NCAM1-206ENST00000525973 KCNA4P22459 653 aa14.68□□□□□ -0.06
NCAM1-206ENST00000525973 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
NCAM1-206ENST00000525973 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
NCAM1-206ENST00000525973 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
NCAM1-206ENST00000525973 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
NCAM1-206ENST00000525973 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
NCAM1-206ENST00000525973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
NCAM1-206ENST00000525973 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
NCAM1-206ENST00000525973 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
NCAM1-206ENST00000525973 NACADO15069 1562 aa14.38□□□□□ -0.11
NCAM1-206ENST00000525973 CC2D2AQ9P2K1 1620 aa14.32□□□□□ -0.12
NCAM1-206ENST00000525973 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
NCAM1-206ENST00000525973 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
NCAM1-206ENST00000525973 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
NCAM1-206ENST00000525973 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.16
NCAM1-206ENST00000525973 CUX2O14529 1486 aa13.89□□□□□ -0.19
NCAM1-206ENST00000525973 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
NCAM1-206ENST00000525973 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
NCAM1-206ENST00000525973 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
NCAM1-206ENST00000525973 CAPN15O75808 1086 aa13.84□□□□□ -0.19
NCAM1-206ENST00000525973 SCRIBQ14160 1630 aa13.83□□□□□ -0.2
NCAM1-206ENST00000525973 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
NCAM1-206ENST00000525973 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
NCAM1-206ENST00000525973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
NCAM1-206ENST00000525973 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
NCAM1-206ENST00000525973 DSG3P32926 999 aa13.75□□□□□ -0.21
NCAM1-206ENST00000525973 APLP2Q06481 763 aa13.74□□□□□ -0.21
NCAM1-206ENST00000525973 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
NCAM1-206ENST00000525973 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
NCAM1-206ENST00000525973 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
NCAM1-206ENST00000525973 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
NCAM1-206ENST00000525973 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
NCAM1-206ENST00000525973 NESP48681 1621 aa13.56□□□□□ -0.24
NCAM1-206ENST00000525973 ABCB7O75027 752 aa13.54□□□□□ -0.24
NCAM1-206ENST00000525973 ZBTB22O15209 634 aa13.51□□□□□ -0.25
NCAM1-206ENST00000525973 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
NCAM1-206ENST00000525973 THOC2Q8NI27 1593 aaKnown RBP13.42□□□□□ -0.26
NCAM1-206ENST00000525973 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
NCAM1-206ENST00000525973 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
NCAM1-206ENST00000525973 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
NCAM1-206ENST00000525973 POLA2Q14181 598 aa13.33□□□□□ -0.28
NCAM1-206ENST00000525973 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
NCAM1-206ENST00000525973 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
NCAM1-206ENST00000525973 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
NCAM1-206ENST00000525973 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
NCAM1-206ENST00000525973 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
NCAM1-206ENST00000525973 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
NCAM1-206ENST00000525973 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
NCAM1-206ENST00000525973 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
NCAM1-206ENST00000525973 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
NCAM1-206ENST00000525973 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
NCAM1-206ENST00000525973 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
NCAM1-206ENST00000525973 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
NCAM1-206ENST00000525973 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
NCAM1-206ENST00000525973 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
NCAM1-206ENST00000525973 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
NCAM1-206ENST00000525973 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
NCAM1-206ENST00000525973 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
NCAM1-206ENST00000525973 BAZ1BQ9UIG0 1483 aaKnown RBP13.06□□□□□ -0.32
NCAM1-206ENST00000525973 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
NCAM1-206ENST00000525973 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
NCAM1-206ENST00000525973 WDR62O43379 1518 aa13.03□□□□□ -0.32
NCAM1-206ENST00000525973 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
NCAM1-206ENST00000525973 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
NCAM1-206ENST00000525973 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
NCAM1-206ENST00000525973 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
NCAM1-206ENST00000525973 POTEHQ6S545 545 aa12.9□□□□□ -0.34
NCAM1-206ENST00000525973 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
NCAM1-206ENST00000525973 CEP164Q9UPV0 1460 aa12.86□□□□□ -0.35
NCAM1-206ENST00000525973 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
NCAM1-206ENST00000525973 FBLN2P98095 1184 aa12.82□□□□□ -0.36
NCAM1-206ENST00000525973 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms