RNA–Protein interactions for RNA: ENST00000524916.1

NCAM1-203, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5

Gene NCAM1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-203ENST00000524916 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
NCAM1-203ENST00000524916 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
NCAM1-203ENST00000524916 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
NCAM1-203ENST00000524916 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
NCAM1-203ENST00000524916 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
NCAM1-203ENST00000524916 FOXD1Q16676 465 aa19.07■□□□□ 0.64
NCAM1-203ENST00000524916 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
NCAM1-203ENST00000524916 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
NCAM1-203ENST00000524916 ADRA2BP18089 450 aa17.79■□□□□ 0.44
NCAM1-203ENST00000524916 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
NCAM1-203ENST00000524916 MSH5O43196 834 aa17.75■□□□□ 0.43
NCAM1-203ENST00000524916 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
NCAM1-203ENST00000524916 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
NCAM1-203ENST00000524916 ABCC9O60706 1549 aa17.18■□□□□ 0.34
NCAM1-203ENST00000524916 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
NCAM1-203ENST00000524916 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
NCAM1-203ENST00000524916 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
NCAM1-203ENST00000524916 NACADO15069 1562 aa16.27■□□□□ 0.2
NCAM1-203ENST00000524916 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
NCAM1-203ENST00000524916 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
NCAM1-203ENST00000524916 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
NCAM1-203ENST00000524916 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
NCAM1-203ENST00000524916 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
NCAM1-203ENST00000524916 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
NCAM1-203ENST00000524916 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
NCAM1-203ENST00000524916 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
NCAM1-203ENST00000524916 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
NCAM1-203ENST00000524916 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
NCAM1-203ENST00000524916 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
NCAM1-203ENST00000524916 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
NCAM1-203ENST00000524916 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
NCAM1-203ENST00000524916 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
NCAM1-203ENST00000524916 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
NCAM1-203ENST00000524916 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
NCAM1-203ENST00000524916 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
NCAM1-203ENST00000524916 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
NCAM1-203ENST00000524916 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
NCAM1-203ENST00000524916 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
NCAM1-203ENST00000524916 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
NCAM1-203ENST00000524916 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
NCAM1-203ENST00000524916 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
NCAM1-203ENST00000524916 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
NCAM1-203ENST00000524916 SMARCA4P51532 1647 aa15.06■□□□□ 0
NCAM1-203ENST00000524916 NCAPD3P42695 1498 aa15.06■□□□□ 0
NCAM1-203ENST00000524916 MROH2BQ7Z745 1585 aa15.04■□□□□ -0
NCAM1-203ENST00000524916 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
NCAM1-203ENST00000524916 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
NCAM1-203ENST00000524916 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
NCAM1-203ENST00000524916 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
NCAM1-203ENST00000524916 NESP48681 1621 aa14.88□□□□□ -0.03
NCAM1-203ENST00000524916 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
NCAM1-203ENST00000524916 WIZO95785 1651 aa14.87□□□□□ -0.03
NCAM1-203ENST00000524916 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
NCAM1-203ENST00000524916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
NCAM1-203ENST00000524916 KCNA4P22459 653 aa14.8□□□□□ -0.04
NCAM1-203ENST00000524916 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
NCAM1-203ENST00000524916 CUX2O14529 1486 aa14.8□□□□□ -0.04
NCAM1-203ENST00000524916 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
NCAM1-203ENST00000524916 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
NCAM1-203ENST00000524916 DNAJC5Q9H3Z4 198 aa14.68□□□□□ -0.06
NCAM1-203ENST00000524916 THOC2Q8NI27 1593 aaKnown RBP14.67□□□□□ -0.06
NCAM1-203ENST00000524916 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
NCAM1-203ENST00000524916 KIF21AQ7Z4S6 1674 aa14.63□□□□□ -0.07
NCAM1-203ENST00000524916 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
NCAM1-203ENST00000524916 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
NCAM1-203ENST00000524916 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
NCAM1-203ENST00000524916 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
NCAM1-203ENST00000524916 CFTRP13569 1480 aa14.5□□□□□ -0.09
NCAM1-203ENST00000524916 WDR62O43379 1518 aa14.45□□□□□ -0.1
NCAM1-203ENST00000524916 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
NCAM1-203ENST00000524916 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
NCAM1-203ENST00000524916 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
NCAM1-203ENST00000524916 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
NCAM1-203ENST00000524916 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
NCAM1-203ENST00000524916 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
NCAM1-203ENST00000524916 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
NCAM1-203ENST00000524916 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
NCAM1-203ENST00000524916 CAPN15O75808 1086 aa14.31□□□□□ -0.12
NCAM1-203ENST00000524916 DSG3P32926 999 aa14.25□□□□□ -0.13
NCAM1-203ENST00000524916 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
NCAM1-203ENST00000524916 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
NCAM1-203ENST00000524916 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
NCAM1-203ENST00000524916 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
NCAM1-203ENST00000524916 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
NCAM1-203ENST00000524916 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
NCAM1-203ENST00000524916 CUX1P39880 1505 aa14.1□□□□□ -0.15
NCAM1-203ENST00000524916 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
NCAM1-203ENST00000524916 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.15
NCAM1-203ENST00000524916 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
NCAM1-203ENST00000524916 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
NCAM1-203ENST00000524916 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
NCAM1-203ENST00000524916 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
NCAM1-203ENST00000524916 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
NCAM1-203ENST00000524916 SOGA1O94964 1423 aa14.04□□□□□ -0.16
NCAM1-203ENST00000524916 ABCB7O75027 752 aa14.03□□□□□ -0.16
NCAM1-203ENST00000524916 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
NCAM1-203ENST00000524916 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
NCAM1-203ENST00000524916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
NCAM1-203ENST00000524916 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
NCAM1-203ENST00000524916 APLP2Q06481 763 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms