RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
SCUBE2-208ENST00000524317 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
SCUBE2-208ENST00000524317 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
SCUBE2-208ENST00000524317 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
SCUBE2-208ENST00000524317 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
SCUBE2-208ENST00000524317 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
SCUBE2-208ENST00000524317 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
SCUBE2-208ENST00000524317 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
SCUBE2-208ENST00000524317 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
SCUBE2-208ENST00000524317 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
SCUBE2-208ENST00000524317 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
SCUBE2-208ENST00000524317 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
SCUBE2-208ENST00000524317 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
SCUBE2-208ENST00000524317 ABCC9O60706 1549 aa20.48■□□□□ 0.87
SCUBE2-208ENST00000524317 NACADO15069 1562 aa20.29■□□□□ 0.84
SCUBE2-208ENST00000524317 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
SCUBE2-208ENST00000524317 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
SCUBE2-208ENST00000524317 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.79
SCUBE2-208ENST00000524317 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
SCUBE2-208ENST00000524317 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
SCUBE2-208ENST00000524317 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
SCUBE2-208ENST00000524317 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
SCUBE2-208ENST00000524317 KCNA4P22459 653 aa19.67■□□□□ 0.74
SCUBE2-208ENST00000524317 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
SCUBE2-208ENST00000524317 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
SCUBE2-208ENST00000524317 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.72
SCUBE2-208ENST00000524317 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCUBE2-208ENST00000524317 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
SCUBE2-208ENST00000524317 WIZO95785 1651 aa19.45■□□□□ 0.7
SCUBE2-208ENST00000524317 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
SCUBE2-208ENST00000524317 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
SCUBE2-208ENST00000524317 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
SCUBE2-208ENST00000524317 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
SCUBE2-208ENST00000524317 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
SCUBE2-208ENST00000524317 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
SCUBE2-208ENST00000524317 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
SCUBE2-208ENST00000524317 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
SCUBE2-208ENST00000524317 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
SCUBE2-208ENST00000524317 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SCUBE2-208ENST00000524317 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
SCUBE2-208ENST00000524317 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-208ENST00000524317 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
SCUBE2-208ENST00000524317 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
SCUBE2-208ENST00000524317 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
SCUBE2-208ENST00000524317 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
SCUBE2-208ENST00000524317 PELP1Q8IZL8 1130 aaKnown RBP18.77■□□□□ 0.59
SCUBE2-208ENST00000524317 DAXXQ9UER7 740 aaPredicted RBP18.77■□□□□ 0.59
SCUBE2-208ENST00000524317 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
SCUBE2-208ENST00000524317 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
SCUBE2-208ENST00000524317 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
SCUBE2-208ENST00000524317 ADRA2BP18089 450 aa18.65■□□□□ 0.58
SCUBE2-208ENST00000524317 SOGA1O94964 1423 aa18.63■□□□□ 0.57
SCUBE2-208ENST00000524317 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
SCUBE2-208ENST00000524317 EEA1Q15075 1411 aa18.56■□□□□ 0.56
SCUBE2-208ENST00000524317 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
SCUBE2-208ENST00000524317 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
SCUBE2-208ENST00000524317 CFTRP13569 1480 aa18.49■□□□□ 0.55
SCUBE2-208ENST00000524317 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
SCUBE2-208ENST00000524317 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
SCUBE2-208ENST00000524317 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
SCUBE2-208ENST00000524317 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
SCUBE2-208ENST00000524317 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
SCUBE2-208ENST00000524317 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
SCUBE2-208ENST00000524317 HRCP23327 699 aa18.34■□□□□ 0.53
SCUBE2-208ENST00000524317 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
SCUBE2-208ENST00000524317 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
SCUBE2-208ENST00000524317 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.53
SCUBE2-208ENST00000524317 CUX1P39880 1505 aa18.33■□□□□ 0.52
SCUBE2-208ENST00000524317 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SCUBE2-208ENST00000524317 ZBTB22O15209 634 aa18.31■□□□□ 0.52
SCUBE2-208ENST00000524317 MYT1Q01538 1121 aa18.3■□□□□ 0.52
SCUBE2-208ENST00000524317 KIF21BO75037 1637 aa18.27■□□□□ 0.51
SCUBE2-208ENST00000524317 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
SCUBE2-208ENST00000524317 PPARGC1BQ86YN6 1023 aaKnown RBP18.19■□□□□ 0.5
SCUBE2-208ENST00000524317 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
SCUBE2-208ENST00000524317 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
SCUBE2-208ENST00000524317 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
SCUBE2-208ENST00000524317 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
SCUBE2-208ENST00000524317 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
SCUBE2-208ENST00000524317 PRXQ9BXM0 1461 aa18.15■□□□□ 0.5
SCUBE2-208ENST00000524317 CLIP1P30622 1438 aa18.11■□□□□ 0.49
SCUBE2-208ENST00000524317 NESP48681 1621 aa18.1■□□□□ 0.49
SCUBE2-208ENST00000524317 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
SCUBE2-208ENST00000524317 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
SCUBE2-208ENST00000524317 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
SCUBE2-208ENST00000524317 CUX2O14529 1486 aa18.05■□□□□ 0.48
SCUBE2-208ENST00000524317 IGF1RP08069 1367 aa18.02■□□□□ 0.47
SCUBE2-208ENST00000524317 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
SCUBE2-208ENST00000524317 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
SCUBE2-208ENST00000524317 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
SCUBE2-208ENST00000524317 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
SCUBE2-208ENST00000524317 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
SCUBE2-208ENST00000524317 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
SCUBE2-208ENST00000524317 ARXQ96QS3 562 aa17.97■□□□□ 0.47
SCUBE2-208ENST00000524317 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
SCUBE2-208ENST00000524317 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
SCUBE2-208ENST00000524317 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
SCUBE2-208ENST00000524317 BCANQ96GW7 911 aa17.92■□□□□ 0.46
SCUBE2-208ENST00000524317 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
SCUBE2-208ENST00000524317 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms