RNA–Protein interactions for RNA: ENST00000524030.1

SLC38A9-225, Transcript of solute carrier family 38 member 9, humanhuman

TSL 3

Gene SLC38A9, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-225ENST00000524030 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
SLC38A9-225ENST00000524030 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
SLC38A9-225ENST00000524030 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
SLC38A9-225ENST00000524030 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
SLC38A9-225ENST00000524030 FOXD1Q16676 465 aa17.07■□□□□ 0.32
SLC38A9-225ENST00000524030 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
SLC38A9-225ENST00000524030 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
SLC38A9-225ENST00000524030 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
SLC38A9-225ENST00000524030 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SLC38A9-225ENST00000524030 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
SLC38A9-225ENST00000524030 MSH5O43196 834 aa15.92■□□□□ 0.14
SLC38A9-225ENST00000524030 ABCC9O60706 1549 aa15.33■□□□□ 0.05
SLC38A9-225ENST00000524030 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
SLC38A9-225ENST00000524030 POTEDQ86YR6 584 aa15.05■□□□□ -0
SLC38A9-225ENST00000524030 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
SLC38A9-225ENST00000524030 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
SLC38A9-225ENST00000524030 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
SLC38A9-225ENST00000524030 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
SLC38A9-225ENST00000524030 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
SLC38A9-225ENST00000524030 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
SLC38A9-225ENST00000524030 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
SLC38A9-225ENST00000524030 NACADO15069 1562 aa14.34□□□□□ -0.11
SLC38A9-225ENST00000524030 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
SLC38A9-225ENST00000524030 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
SLC38A9-225ENST00000524030 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
SLC38A9-225ENST00000524030 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
SLC38A9-225ENST00000524030 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLC38A9-225ENST00000524030 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
SLC38A9-225ENST00000524030 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
SLC38A9-225ENST00000524030 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
SLC38A9-225ENST00000524030 KCNA4P22459 653 aa14.04□□□□□ -0.16
SLC38A9-225ENST00000524030 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
SLC38A9-225ENST00000524030 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
SLC38A9-225ENST00000524030 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
SLC38A9-225ENST00000524030 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
SLC38A9-225ENST00000524030 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
SLC38A9-225ENST00000524030 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
SLC38A9-225ENST00000524030 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
SLC38A9-225ENST00000524030 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
SLC38A9-225ENST00000524030 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
SLC38A9-225ENST00000524030 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
SLC38A9-225ENST00000524030 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
SLC38A9-225ENST00000524030 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
SLC38A9-225ENST00000524030 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
SLC38A9-225ENST00000524030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC38A9-225ENST00000524030 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
SLC38A9-225ENST00000524030 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
SLC38A9-225ENST00000524030 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
SLC38A9-225ENST00000524030 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
SLC38A9-225ENST00000524030 CUX2O14529 1486 aa13.33□□□□□ -0.28
SLC38A9-225ENST00000524030 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
SLC38A9-225ENST00000524030 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
SLC38A9-225ENST00000524030 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
SLC38A9-225ENST00000524030 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
SLC38A9-225ENST00000524030 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
SLC38A9-225ENST00000524030 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
SLC38A9-225ENST00000524030 NESP48681 1621 aa13.13□□□□□ -0.31
SLC38A9-225ENST00000524030 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
SLC38A9-225ENST00000524030 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
SLC38A9-225ENST00000524030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
SLC38A9-225ENST00000524030 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
SLC38A9-225ENST00000524030 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
SLC38A9-225ENST00000524030 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
SLC38A9-225ENST00000524030 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
SLC38A9-225ENST00000524030 APLP2Q06481 763 aa13.02□□□□□ -0.33
SLC38A9-225ENST00000524030 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
SLC38A9-225ENST00000524030 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
SLC38A9-225ENST00000524030 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
SLC38A9-225ENST00000524030 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
SLC38A9-225ENST00000524030 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
SLC38A9-225ENST00000524030 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
SLC38A9-225ENST00000524030 ZBTB22O15209 634 aa12.92□□□□□ -0.34
SLC38A9-225ENST00000524030 CAPN15O75808 1086 aa12.91□□□□□ -0.34
SLC38A9-225ENST00000524030 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
SLC38A9-225ENST00000524030 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
SLC38A9-225ENST00000524030 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
SLC38A9-225ENST00000524030 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
SLC38A9-225ENST00000524030 WDR62O43379 1518 aa12.84□□□□□ -0.35
SLC38A9-225ENST00000524030 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
SLC38A9-225ENST00000524030 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
SLC38A9-225ENST00000524030 DSG3P32926 999 aa12.81□□□□□ -0.36
SLC38A9-225ENST00000524030 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
SLC38A9-225ENST00000524030 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
SLC38A9-225ENST00000524030 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
SLC38A9-225ENST00000524030 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
SLC38A9-225ENST00000524030 WIZO95785 1651 aa12.74□□□□□ -0.37
SLC38A9-225ENST00000524030 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
SLC38A9-225ENST00000524030 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
SLC38A9-225ENST00000524030 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
SLC38A9-225ENST00000524030 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
SLC38A9-225ENST00000524030 ABCB7O75027 752 aa12.61□□□□□ -0.39
SLC38A9-225ENST00000524030 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
SLC38A9-225ENST00000524030 CFTRP13569 1480 aa12.6□□□□□ -0.39
SLC38A9-225ENST00000524030 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
SLC38A9-225ENST00000524030 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
SLC38A9-225ENST00000524030 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
SLC38A9-225ENST00000524030 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
SLC38A9-225ENST00000524030 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
SLC38A9-225ENST00000524030 TOP2AP11388 1531 aaKnown RBP12.55□□□□□ -0.4
SLC38A9-225ENST00000524030 POLA2Q14181 598 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms