RNA–Protein interactions for RNA: ENST00000523625.5

ZFHX4-209, Transcript of zinc finger homeobox 4, humanhuman

TSL 5

Gene ZFHX4, Length 989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-209ENST00000523625 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
ZFHX4-209ENST00000523625 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
ZFHX4-209ENST00000523625 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
ZFHX4-209ENST00000523625 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
ZFHX4-209ENST00000523625 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
ZFHX4-209ENST00000523625 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
ZFHX4-209ENST00000523625 ABCC9O60706 1549 aa17.42■□□□□ 0.38
ZFHX4-209ENST00000523625 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
ZFHX4-209ENST00000523625 ADRA2BP18089 450 aa16.63■□□□□ 0.25
ZFHX4-209ENST00000523625 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
ZFHX4-209ENST00000523625 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
ZFHX4-209ENST00000523625 NACADO15069 1562 aa16.43■□□□□ 0.22
ZFHX4-209ENST00000523625 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
ZFHX4-209ENST00000523625 KCNA4P22459 653 aa16.38■□□□□ 0.21
ZFHX4-209ENST00000523625 FOXD1Q16676 465 aa16.37■□□□□ 0.21
ZFHX4-209ENST00000523625 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
ZFHX4-209ENST00000523625 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
ZFHX4-209ENST00000523625 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
ZFHX4-209ENST00000523625 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
ZFHX4-209ENST00000523625 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
ZFHX4-209ENST00000523625 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
ZFHX4-209ENST00000523625 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
ZFHX4-209ENST00000523625 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
ZFHX4-209ENST00000523625 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
ZFHX4-209ENST00000523625 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
ZFHX4-209ENST00000523625 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
ZFHX4-209ENST00000523625 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
ZFHX4-209ENST00000523625 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
ZFHX4-209ENST00000523625 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
ZFHX4-209ENST00000523625 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
ZFHX4-209ENST00000523625 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
ZFHX4-209ENST00000523625 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
ZFHX4-209ENST00000523625 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
ZFHX4-209ENST00000523625 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
ZFHX4-209ENST00000523625 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
ZFHX4-209ENST00000523625 NCAPD3P42695 1498 aa15.18■□□□□ 0.02
ZFHX4-209ENST00000523625 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
ZFHX4-209ENST00000523625 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
ZFHX4-209ENST00000523625 ZBTB22O15209 634 aa15.1■□□□□ 0.01
ZFHX4-209ENST00000523625 CUX2O14529 1486 aa15.08■□□□□ 0
ZFHX4-209ENST00000523625 SMARCA4P51532 1647 aa15.06■□□□□ 0
ZFHX4-209ENST00000523625 HMGXB3Q12766 1538 aa15.05■□□□□ -0
ZFHX4-209ENST00000523625 SMARCA2P51531 1590 aa15.03■□□□□ -0
ZFHX4-209ENST00000523625 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
ZFHX4-209ENST00000523625 ERCC6Q03468 1493 aa15□□□□□ -0.01
ZFHX4-209ENST00000523625 NESP48681 1621 aa14.95□□□□□ -0.02
ZFHX4-209ENST00000523625 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
ZFHX4-209ENST00000523625 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
ZFHX4-209ENST00000523625 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
ZFHX4-209ENST00000523625 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
ZFHX4-209ENST00000523625 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
ZFHX4-209ENST00000523625 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
ZFHX4-209ENST00000523625 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
ZFHX4-209ENST00000523625 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
ZFHX4-209ENST00000523625 MSH5O43196 834 aa14.74□□□□□ -0.05
ZFHX4-209ENST00000523625 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
ZFHX4-209ENST00000523625 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
ZFHX4-209ENST00000523625 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
ZFHX4-209ENST00000523625 WIZO95785 1651 aa14.66□□□□□ -0.06
ZFHX4-209ENST00000523625 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
ZFHX4-209ENST00000523625 WDR62O43379 1518 aa14.61□□□□□ -0.07
ZFHX4-209ENST00000523625 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
ZFHX4-209ENST00000523625 CFTRP13569 1480 aa14.51□□□□□ -0.09
ZFHX4-209ENST00000523625 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
ZFHX4-209ENST00000523625 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
ZFHX4-209ENST00000523625 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
ZFHX4-209ENST00000523625 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
ZFHX4-209ENST00000523625 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
ZFHX4-209ENST00000523625 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
ZFHX4-209ENST00000523625 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
ZFHX4-209ENST00000523625 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
ZFHX4-209ENST00000523625 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
ZFHX4-209ENST00000523625 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
ZFHX4-209ENST00000523625 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
ZFHX4-209ENST00000523625 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
ZFHX4-209ENST00000523625 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
ZFHX4-209ENST00000523625 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
ZFHX4-209ENST00000523625 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
ZFHX4-209ENST00000523625 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
ZFHX4-209ENST00000523625 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
ZFHX4-209ENST00000523625 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
ZFHX4-209ENST00000523625 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
ZFHX4-209ENST00000523625 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
ZFHX4-209ENST00000523625 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
ZFHX4-209ENST00000523625 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
ZFHX4-209ENST00000523625 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
ZFHX4-209ENST00000523625 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
ZFHX4-209ENST00000523625 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
ZFHX4-209ENST00000523625 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
ZFHX4-209ENST00000523625 FKBP8Q14318 412 aa14.15□□□□□ -0.14
ZFHX4-209ENST00000523625 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
ZFHX4-209ENST00000523625 ARHGEF11O15085 1522 aa14.14□□□□□ -0.15
ZFHX4-209ENST00000523625 CHD1O14646 1710 aa14.1□□□□□ -0.15
ZFHX4-209ENST00000523625 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
ZFHX4-209ENST00000523625 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
ZFHX4-209ENST00000523625 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
ZFHX4-209ENST00000523625 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
ZFHX4-209ENST00000523625 ARAP1Q96P48 1450 aa14□□□□□ -0.17
ZFHX4-209ENST00000523625 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
ZFHX4-209ENST00000523625 SOGA1O94964 1423 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms