RNA–Protein interactions for RNA: ENST00000522567.5

LRRCC1-204, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,122 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-204ENST00000522567 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
LRRCC1-204ENST00000522567 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
LRRCC1-204ENST00000522567 ABCC9O60706 1549 aa29.86■■■□□ 2.37
LRRCC1-204ENST00000522567 HRCP23327 699 aa28.79■■■□□ 2.2
LRRCC1-204ENST00000522567 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
LRRCC1-204ENST00000522567 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
LRRCC1-204ENST00000522567 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
LRRCC1-204ENST00000522567 NACADO15069 1562 aa28.38■■■□□ 2.13
LRRCC1-204ENST00000522567 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
LRRCC1-204ENST00000522567 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
LRRCC1-204ENST00000522567 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
LRRCC1-204ENST00000522567 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
LRRCC1-204ENST00000522567 PPARGC1BQ86YN6 1023 aaKnown RBP27.97■■■□□ 2.07
LRRCC1-204ENST00000522567 PCGF6Q9BYE7 350 aa27.9■■■□□ 2.06
LRRCC1-204ENST00000522567 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
LRRCC1-204ENST00000522567 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
LRRCC1-204ENST00000522567 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
LRRCC1-204ENST00000522567 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
LRRCC1-204ENST00000522567 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
LRRCC1-204ENST00000522567 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
LRRCC1-204ENST00000522567 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
LRRCC1-204ENST00000522567 SCAF1Q9H7N4 1312 aaKnown RBP27.29■■□□□ 1.96
LRRCC1-204ENST00000522567 MYT1Q01538 1121 aa27.19■■□□□ 1.94
LRRCC1-204ENST00000522567 TRIM26Q12899 539 aaPredicted RBP27.12■■□□□ 1.93
LRRCC1-204ENST00000522567 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
LRRCC1-204ENST00000522567 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
LRRCC1-204ENST00000522567 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
LRRCC1-204ENST00000522567 LOC105371045A0A1W2PR82 267 aa26.83■■□□□ 1.88
LRRCC1-204ENST00000522567 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
LRRCC1-204ENST00000522567 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
LRRCC1-204ENST00000522567 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
LRRCC1-204ENST00000522567 NEUROD1Q13562 356 aa26.44■■□□□ 1.82
LRRCC1-204ENST00000522567 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
LRRCC1-204ENST00000522567 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
LRRCC1-204ENST00000522567 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
LRRCC1-204ENST00000522567 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
LRRCC1-204ENST00000522567 GTF3C3Q9Y5Q9 886 aa26.29■■□□□ 1.8
LRRCC1-204ENST00000522567 NCAPD3P42695 1498 aa26.26■■□□□ 1.79
LRRCC1-204ENST00000522567 CENPBP07199 599 aaPredicted RBP26.19■■□□□ 1.78
LRRCC1-204ENST00000522567 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
LRRCC1-204ENST00000522567 WIZO95785 1651 aa26.12■■□□□ 1.77
LRRCC1-204ENST00000522567 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
LRRCC1-204ENST00000522567 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
LRRCC1-204ENST00000522567 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
LRRCC1-204ENST00000522567 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
LRRCC1-204ENST00000522567 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
LRRCC1-204ENST00000522567 NESP48681 1621 aa25.82■■□□□ 1.72
LRRCC1-204ENST00000522567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
LRRCC1-204ENST00000522567 CCER1Q8TC90 406 aaPredicted RBP25.76■■□□□ 1.71
LRRCC1-204ENST00000522567 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
LRRCC1-204ENST00000522567 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
LRRCC1-204ENST00000522567 TTBK1Q5TCY1 1321 aaPredicted RBP25.62■■□□□ 1.69
LRRCC1-204ENST00000522567 FAM9AQ8IZU1 332 aaPredicted RBP25.58■■□□□ 1.69
LRRCC1-204ENST00000522567 CCDC88BA6NC98 1476 aa25.57■■□□□ 1.68
LRRCC1-204ENST00000522567 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
LRRCC1-204ENST00000522567 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
LRRCC1-204ENST00000522567 ZNF316A6NFI3 1004 aaPredicted RBP25.46■■□□□ 1.67
LRRCC1-204ENST00000522567 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
LRRCC1-204ENST00000522567 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
LRRCC1-204ENST00000522567 YTHDC1Q96MU7 727 aaKnown RBP25.37■■□□□ 1.65
LRRCC1-204ENST00000522567 CUX2O14529 1486 aa25.34■■□□□ 1.65
LRRCC1-204ENST00000522567 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.64
LRRCC1-204ENST00000522567 CFTRP13569 1480 aa25.33■■□□□ 1.64
LRRCC1-204ENST00000522567 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
LRRCC1-204ENST00000522567 MIER1Q8N108 512 aa25.26■■□□□ 1.63
LRRCC1-204ENST00000522567 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
LRRCC1-204ENST00000522567 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
LRRCC1-204ENST00000522567 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
LRRCC1-204ENST00000522567 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
LRRCC1-204ENST00000522567 ANP32EQ9BTT0 268 aa25.19■■□□□ 1.62
LRRCC1-204ENST00000522567 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
LRRCC1-204ENST00000522567 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
LRRCC1-204ENST00000522567 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
LRRCC1-204ENST00000522567 WDR62O43379 1518 aa25.06■■□□□ 1.6
LRRCC1-204ENST00000522567 SUPT16HQ9Y5B9 1047 aaKnown RBP25.05■■□□□ 1.6
LRRCC1-204ENST00000522567 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
LRRCC1-204ENST00000522567 TSHZ2Q9NRE2 1034 aa25.01■■□□□ 1.59
LRRCC1-204ENST00000522567 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
LRRCC1-204ENST00000522567 CEP162Q5TB80 1403 aa24.89■■□□□ 1.58
LRRCC1-204ENST00000522567 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
LRRCC1-204ENST00000522567 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
LRRCC1-204ENST00000522567 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
LRRCC1-204ENST00000522567 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
LRRCC1-204ENST00000522567 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
LRRCC1-204ENST00000522567 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
LRRCC1-204ENST00000522567 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
LRRCC1-204ENST00000522567 CUX1P39880 1505 aa24.68■■□□□ 1.54
LRRCC1-204ENST00000522567 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
LRRCC1-204ENST00000522567 BIVM-ERCC5R4GMW8 1640 aa24.66■■□□□ 1.54
LRRCC1-204ENST00000522567 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
LRRCC1-204ENST00000522567 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
LRRCC1-204ENST00000522567 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.53
LRRCC1-204ENST00000522567 AQRO60306 1485 aaKnown RBP eCLIP24.54■■□□□ 1.52
LRRCC1-204ENST00000522567 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
LRRCC1-204ENST00000522567 SOGA1O94964 1423 aa24.53■■□□□ 1.52
LRRCC1-204ENST00000522567 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
LRRCC1-204ENST00000522567 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
LRRCC1-204ENST00000522567 EEA1Q15075 1411 aa24.5■■□□□ 1.51
LRRCC1-204ENST00000522567 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
LRRCC1-204ENST00000522567 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms