RNA–Protein interactions for RNA: ENST00000521290.5

POLB-209, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 863 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-209ENST00000521290 AEBP2Q6ZN18 517 aaPredicted RBP28.63■■■□□ 2.17
POLB-209ENST00000521290 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
POLB-209ENST00000521290 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
POLB-209ENST00000521290 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
POLB-209ENST00000521290 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
POLB-209ENST00000521290 FOXD1Q16676 465 aa22.77■■□□□ 1.24
POLB-209ENST00000521290 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
POLB-209ENST00000521290 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
POLB-209ENST00000521290 MSH5O43196 834 aa21.24■□□□□ 0.99
POLB-209ENST00000521290 ADRA2BP18089 450 aa21.21■□□□□ 0.99
POLB-209ENST00000521290 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
POLB-209ENST00000521290 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
POLB-209ENST00000521290 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
POLB-209ENST00000521290 ABCC9O60706 1549 aa19.88■□□□□ 0.77
POLB-209ENST00000521290 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
POLB-209ENST00000521290 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
POLB-209ENST00000521290 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
POLB-209ENST00000521290 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
POLB-209ENST00000521290 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
POLB-209ENST00000521290 NACADO15069 1562 aa19.14■□□□□ 0.65
POLB-209ENST00000521290 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
POLB-209ENST00000521290 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
POLB-209ENST00000521290 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
POLB-209ENST00000521290 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
POLB-209ENST00000521290 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
POLB-209ENST00000521290 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
POLB-209ENST00000521290 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
POLB-209ENST00000521290 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
POLB-209ENST00000521290 KCNA4P22459 653 aa18.59■□□□□ 0.57
POLB-209ENST00000521290 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
POLB-209ENST00000521290 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
POLB-209ENST00000521290 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
POLB-209ENST00000521290 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
POLB-209ENST00000521290 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
POLB-209ENST00000521290 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
POLB-209ENST00000521290 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
POLB-209ENST00000521290 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
POLB-209ENST00000521290 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
POLB-209ENST00000521290 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
POLB-209ENST00000521290 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
POLB-209ENST00000521290 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
POLB-209ENST00000521290 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
POLB-209ENST00000521290 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
POLB-209ENST00000521290 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
POLB-209ENST00000521290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
POLB-209ENST00000521290 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
POLB-209ENST00000521290 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
POLB-209ENST00000521290 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
POLB-209ENST00000521290 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
POLB-209ENST00000521290 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
POLB-209ENST00000521290 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
POLB-209ENST00000521290 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
POLB-209ENST00000521290 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
POLB-209ENST00000521290 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
POLB-209ENST00000521290 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
POLB-209ENST00000521290 WIZO95785 1651 aa17.48■□□□□ 0.39
POLB-209ENST00000521290 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
POLB-209ENST00000521290 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
POLB-209ENST00000521290 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
POLB-209ENST00000521290 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
POLB-209ENST00000521290 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
POLB-209ENST00000521290 NESP48681 1621 aa17.2■□□□□ 0.34
POLB-209ENST00000521290 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
POLB-209ENST00000521290 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
POLB-209ENST00000521290 CCDC88BA6NC98 1476 aa17.16■□□□□ 0.34
POLB-209ENST00000521290 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
POLB-209ENST00000521290 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
POLB-209ENST00000521290 ZBTB22O15209 634 aa17.12■□□□□ 0.33
POLB-209ENST00000521290 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
POLB-209ENST00000521290 CFTRP13569 1480 aa17.08■□□□□ 0.32
POLB-209ENST00000521290 CAPN15O75808 1086 aa17.06■□□□□ 0.32
POLB-209ENST00000521290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
POLB-209ENST00000521290 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
POLB-209ENST00000521290 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
POLB-209ENST00000521290 DSG3P32926 999 aa16.99■□□□□ 0.31
POLB-209ENST00000521290 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
POLB-209ENST00000521290 APLP2Q06481 763 aa16.96■□□□□ 0.31
POLB-209ENST00000521290 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
POLB-209ENST00000521290 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
POLB-209ENST00000521290 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
POLB-209ENST00000521290 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
POLB-209ENST00000521290 CUX2O14529 1486 aa16.9■□□□□ 0.3
POLB-209ENST00000521290 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
POLB-209ENST00000521290 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
POLB-209ENST00000521290 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
POLB-209ENST00000521290 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
POLB-209ENST00000521290 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
POLB-209ENST00000521290 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
POLB-209ENST00000521290 WDR62O43379 1518 aa16.79■□□□□ 0.28
POLB-209ENST00000521290 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
POLB-209ENST00000521290 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
POLB-209ENST00000521290 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
POLB-209ENST00000521290 ABCB7O75027 752 aa16.68■□□□□ 0.26
POLB-209ENST00000521290 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
POLB-209ENST00000521290 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
POLB-209ENST00000521290 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
POLB-209ENST00000521290 CUX1P39880 1505 aa16.6■□□□□ 0.25
POLB-209ENST00000521290 SOGA1O94964 1423 aa16.57■□□□□ 0.24
POLB-209ENST00000521290 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
POLB-209ENST00000521290 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms