RNA–Protein interactions for RNA: ENST00000520633.1

PPP1R42-206, Transcript of protein phosphatase 1 regulatory subunit 42, humanhuman

TSL 3

Gene PPP1R42, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R42-206ENST00000520633 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
PPP1R42-206ENST00000520633 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
PPP1R42-206ENST00000520633 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
PPP1R42-206ENST00000520633 PHF23Q9BUL5 403 aaPredicted RBP18.33■□□□□ 0.52
PPP1R42-206ENST00000520633 FOXD1Q16676 465 aa17.37■□□□□ 0.37
PPP1R42-206ENST00000520633 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
PPP1R42-206ENST00000520633 MSH5O43196 834 aa16.38■□□□□ 0.21
PPP1R42-206ENST00000520633 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
PPP1R42-206ENST00000520633 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
PPP1R42-206ENST00000520633 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
PPP1R42-206ENST00000520633 ADRA2BP18089 450 aa15.96■□□□□ 0.15
PPP1R42-206ENST00000520633 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
PPP1R42-206ENST00000520633 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
PPP1R42-206ENST00000520633 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
PPP1R42-206ENST00000520633 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
PPP1R42-206ENST00000520633 ABCC9O60706 1549 aa14.46□□□□□ -0.1
PPP1R42-206ENST00000520633 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
PPP1R42-206ENST00000520633 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
PPP1R42-206ENST00000520633 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
PPP1R42-206ENST00000520633 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
PPP1R42-206ENST00000520633 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
PPP1R42-206ENST00000520633 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
PPP1R42-206ENST00000520633 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
PPP1R42-206ENST00000520633 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
PPP1R42-206ENST00000520633 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
PPP1R42-206ENST00000520633 CCDC180Q9P1Z9 1646 aa13.66□□□□□ -0.22
PPP1R42-206ENST00000520633 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
PPP1R42-206ENST00000520633 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
PPP1R42-206ENST00000520633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
PPP1R42-206ENST00000520633 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
PPP1R42-206ENST00000520633 RB1CC1Q8TDY2 1594 aa13.35□□□□□ -0.27
PPP1R42-206ENST00000520633 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
PPP1R42-206ENST00000520633 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
PPP1R42-206ENST00000520633 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
PPP1R42-206ENST00000520633 NACADO15069 1562 aa13.07□□□□□ -0.32
PPP1R42-206ENST00000520633 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
PPP1R42-206ENST00000520633 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
PPP1R42-206ENST00000520633 CAPN15O75808 1086 aa13.02□□□□□ -0.33
PPP1R42-206ENST00000520633 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PPP1R42-206ENST00000520633 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
PPP1R42-206ENST00000520633 DSG3P32926 999 aa12.94□□□□□ -0.34
PPP1R42-206ENST00000520633 POTEHQ6S545 545 aa12.94□□□□□ -0.34
PPP1R42-206ENST00000520633 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
PPP1R42-206ENST00000520633 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
PPP1R42-206ENST00000520633 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
PPP1R42-206ENST00000520633 CUX2O14529 1486 aa12.7□□□□□ -0.38
PPP1R42-206ENST00000520633 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
PPP1R42-206ENST00000520633 ABCB7O75027 752 aa12.69□□□□□ -0.38
PPP1R42-206ENST00000520633 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
PPP1R42-206ENST00000520633 KCNA4P22459 653 aa12.67□□□□□ -0.38
PPP1R42-206ENST00000520633 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
PPP1R42-206ENST00000520633 APLP2Q06481 763 aa12.64□□□□□ -0.39
PPP1R42-206ENST00000520633 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
PPP1R42-206ENST00000520633 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
PPP1R42-206ENST00000520633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
PPP1R42-206ENST00000520633 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
PPP1R42-206ENST00000520633 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
PPP1R42-206ENST00000520633 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
PPP1R42-206ENST00000520633 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
PPP1R42-206ENST00000520633 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
PPP1R42-206ENST00000520633 POLA2Q14181 598 aa12.3□□□□□ -0.44
PPP1R42-206ENST00000520633 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
PPP1R42-206ENST00000520633 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
PPP1R42-206ENST00000520633 NESP48681 1621 aa12.25□□□□□ -0.45
PPP1R42-206ENST00000520633 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
PPP1R42-206ENST00000520633 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
PPP1R42-206ENST00000520633 ZCCHC6Q5VYS8 1495 aaKnown RBP12.2□□□□□ -0.46
PPP1R42-206ENST00000520633 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
PPP1R42-206ENST00000520633 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
PPP1R42-206ENST00000520633 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
PPP1R42-206ENST00000520633 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
PPP1R42-206ENST00000520633 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
PPP1R42-206ENST00000520633 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
PPP1R42-206ENST00000520633 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
PPP1R42-206ENST00000520633 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
PPP1R42-206ENST00000520633 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
PPP1R42-206ENST00000520633 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
PPP1R42-206ENST00000520633 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
PPP1R42-206ENST00000520633 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
PPP1R42-206ENST00000520633 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
PPP1R42-206ENST00000520633 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
PPP1R42-206ENST00000520633 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
PPP1R42-206ENST00000520633 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
PPP1R42-206ENST00000520633 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
PPP1R42-206ENST00000520633 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
PPP1R42-206ENST00000520633 WDR62O43379 1518 aa11.88□□□□□ -0.51
PPP1R42-206ENST00000520633 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
PPP1R42-206ENST00000520633 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
PPP1R42-206ENST00000520633 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
PPP1R42-206ENST00000520633 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PPP1R42-206ENST00000520633 HAX1O00165 279 aa11.84□□□□□ -0.51
PPP1R42-206ENST00000520633 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
PPP1R42-206ENST00000520633 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
PPP1R42-206ENST00000520633 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
PPP1R42-206ENST00000520633 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
PPP1R42-206ENST00000520633 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
PPP1R42-206ENST00000520633 ARAP1Q96P48 1450 aa11.72□□□□□ -0.53
PPP1R42-206ENST00000520633 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPP1R42-206ENST00000520633 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
PPP1R42-206ENST00000520633 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms