RNA–Protein interactions for RNA: ENST00000518772.1

RMDN1-207, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2

Gene RMDN1, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-207ENST00000518772 AEBP2Q6ZN18 517 aaPredicted RBP45.84■■■■■ 4.93
RMDN1-207ENST00000518772 CHIC1Q5VXU3 224 aa45.08■■■■■ 4.81
RMDN1-207ENST00000518772 PHF23Q9BUL5 403 aaPredicted RBP39.67■■■■□ 3.94
RMDN1-207ENST00000518772 SENP3Q9H4L4 574 aaPredicted RBP38.89■■■■□ 3.82
RMDN1-207ENST00000518772 PLPPR3Q6T4P5 718 aa36.77■■■■□ 3.48
RMDN1-207ENST00000518772 NISCHQ9Y2I1 1504 aa36.7■■■■□ 3.47
RMDN1-207ENST00000518772 FOXD1Q16676 465 aa36.04■■■■□ 3.36
RMDN1-207ENST00000518772 ADRA2BP18089 450 aa34.93■■■■□ 3.18
RMDN1-207ENST00000518772 PPP6R1Q9UPN7 881 aa34.91■■■■□ 3.18
RMDN1-207ENST00000518772 PIAS4Q8N2W9 510 aaPredicted RBP34.1■■■■□ 3.05
RMDN1-207ENST00000518772 MSH5O43196 834 aa33.13■■■□□ 2.89
RMDN1-207ENST00000518772 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
RMDN1-207ENST00000518772 ABCC9O60706 1549 aa32.58■■■□□ 2.81
RMDN1-207ENST00000518772 PPP4R3CPQ6ZMV5 832 aa32.44■■■□□ 2.78
RMDN1-207ENST00000518772 KCNA4P22459 653 aa32.03■■■□□ 2.72
RMDN1-207ENST00000518772 SCAF1Q9H7N4 1312 aaKnown RBP31.98■■■□□ 2.71
RMDN1-207ENST00000518772 NCBP3Q53F19 620 aaKnown RBP31.7■■■□□ 2.67
RMDN1-207ENST00000518772 MAPK8IP2Q13387 824 aaPredicted RBP31.59■■■□□ 2.65
RMDN1-207ENST00000518772 CNKSR2Q8WXI2 1034 aa31.46■■■□□ 2.63
RMDN1-207ENST00000518772 NPM3O75607 178 aaKnown RBP31.2■■■□□ 2.59
RMDN1-207ENST00000518772 DMRT2Q9Y5R5 561 aa31.07■■■□□ 2.56
RMDN1-207ENST00000518772 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
RMDN1-207ENST00000518772 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
RMDN1-207ENST00000518772 NACADO15069 1562 aa30.88■■■□□ 2.53
RMDN1-207ENST00000518772 RNF216Q9NWF9 866 aaPredicted RBP30.76■■■□□ 2.51
RMDN1-207ENST00000518772 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
RMDN1-207ENST00000518772 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
RMDN1-207ENST00000518772 HOXD11P31277 338 aaPredicted RBP30.54■■■□□ 2.48
RMDN1-207ENST00000518772 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
RMDN1-207ENST00000518772 ZCCHC6Q5VYS8 1495 aaKnown RBP30.46■■■□□ 2.47
RMDN1-207ENST00000518772 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
RMDN1-207ENST00000518772 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
RMDN1-207ENST00000518772 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
RMDN1-207ENST00000518772 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
RMDN1-207ENST00000518772 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
RMDN1-207ENST00000518772 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
RMDN1-207ENST00000518772 DCAF8L1A6NGE4 600 aa29.81■■■□□ 2.36
RMDN1-207ENST00000518772 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
RMDN1-207ENST00000518772 POTEDQ86YR6 584 aa29.63■■■□□ 2.33
RMDN1-207ENST00000518772 CSRNP3Q8WYN3 585 aa29.55■■■□□ 2.32
RMDN1-207ENST00000518772 ZBTB22O15209 634 aa29.44■■■□□ 2.3
RMDN1-207ENST00000518772 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
RMDN1-207ENST00000518772 FOXD4L1Q9NU39 408 aa29.39■■■□□ 2.3
RMDN1-207ENST00000518772 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
RMDN1-207ENST00000518772 SLC4A2P04920 1241 aa29.37■■■□□ 2.29
RMDN1-207ENST00000518772 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
RMDN1-207ENST00000518772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.17■■■□□ 2.26
RMDN1-207ENST00000518772 MYCNP04198 464 aaPredicted RBP28.84■■■□□ 2.21
RMDN1-207ENST00000518772 U3KPZ7 1027 aaPredicted RBP28.69■■■□□ 2.18
RMDN1-207ENST00000518772 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
RMDN1-207ENST00000518772 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
RMDN1-207ENST00000518772 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
RMDN1-207ENST00000518772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
RMDN1-207ENST00000518772 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
RMDN1-207ENST00000518772 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
RMDN1-207ENST00000518772 RNF39Q9H2S5 420 aa28.4■■■□□ 2.14
RMDN1-207ENST00000518772 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
RMDN1-207ENST00000518772 SAMD1Q6SPF0 538 aaPredicted RBP28.36■■■□□ 2.13
RMDN1-207ENST00000518772 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
RMDN1-207ENST00000518772 ATXN8OSP0DMR3 200 aa28.32■■■□□ 2.12
RMDN1-207ENST00000518772 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
RMDN1-207ENST00000518772 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
RMDN1-207ENST00000518772 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
RMDN1-207ENST00000518772 NESP48681 1621 aa28.1■■■□□ 2.09
RMDN1-207ENST00000518772 APLP2Q06481 763 aa28.1■■■□□ 2.09
RMDN1-207ENST00000518772 C1QBPQ07021 282 aaKnown RBP28.09■■■□□ 2.09
RMDN1-207ENST00000518772 ATF5Q9Y2D1 282 aaPredicted RBP28.02■■■□□ 2.08
RMDN1-207ENST00000518772 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
RMDN1-207ENST00000518772 WIZO95785 1651 aa27.97■■■□□ 2.07
RMDN1-207ENST00000518772 RSF1Q96T23 1441 aaPredicted RBP27.85■■■□□ 2.05
RMDN1-207ENST00000518772 CUX2O14529 1486 aa27.85■■■□□ 2.05
RMDN1-207ENST00000518772 SPINK5Q9NQ38 1064 aaPredicted RBP27.81■■■□□ 2.04
RMDN1-207ENST00000518772 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
RMDN1-207ENST00000518772 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
RMDN1-207ENST00000518772 CAPN15O75808 1086 aa27.73■■■□□ 2.03
RMDN1-207ENST00000518772 TRHP20396 242 aaPredicted RBP27.67■■■□□ 2.02
RMDN1-207ENST00000518772 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
RMDN1-207ENST00000518772 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
RMDN1-207ENST00000518772 DNAJC5Q9H3Z4 198 aa27.65■■■□□ 2.02
RMDN1-207ENST00000518772 ZNF219Q9P2Y4 722 aaPredicted RBP27.64■■■□□ 2.02
RMDN1-207ENST00000518772 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.02
RMDN1-207ENST00000518772 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
RMDN1-207ENST00000518772 CACNB1Q02641 598 aaPredicted RBP27.5■■□□□ 1.99
RMDN1-207ENST00000518772 CFTRP13569 1480 aa27.46■■□□□ 1.99
RMDN1-207ENST00000518772 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
RMDN1-207ENST00000518772 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
RMDN1-207ENST00000518772 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
RMDN1-207ENST00000518772 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
RMDN1-207ENST00000518772 WDR62O43379 1518 aa27.34■■□□□ 1.97
RMDN1-207ENST00000518772 POLA2Q14181 598 aa27.27■■□□□ 1.96
RMDN1-207ENST00000518772 ABCB7O75027 752 aa27.21■■□□□ 1.95
RMDN1-207ENST00000518772 URB2Q14146 1524 aaKnown RBP27.19■■□□□ 1.94
RMDN1-207ENST00000518772 DSG3P32926 999 aa27.14■■□□□ 1.94
RMDN1-207ENST00000518772 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
RMDN1-207ENST00000518772 TOPBP1Q92547 1522 aa26.91■■□□□ 1.9
RMDN1-207ENST00000518772 FBLN2P98095 1184 aa26.88■■□□□ 1.89
RMDN1-207ENST00000518772 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
RMDN1-207ENST00000518772 ZBTB12Q9Y330 459 aaPredicted RBP26.84■■□□□ 1.89
RMDN1-207ENST00000518772 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
RMDN1-207ENST00000518772 MKRN4PQ13434 485 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms