RNA–Protein interactions for RNA: ENST00000517248.1

RN7SKP57-201, Transcript of RNA, 7SK small nuclear pseudogene 57, humanhuman

BASIC

Gene RN7SKP57, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP57-201ENST00000517248 AEBP2Q6ZN18 517 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP57-201ENST00000517248 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
RN7SKP57-201ENST00000517248 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
RN7SKP57-201ENST00000517248 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP57-201ENST00000517248 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
RN7SKP57-201ENST00000517248 FOXD1Q16676 465 aa10.26□□□□□ -0.77
RN7SKP57-201ENST00000517248 MSH5O43196 834 aa9.92□□□□□ -0.82
RN7SKP57-201ENST00000517248 PIAS4Q8N2W9 510 aaPredicted RBP9.3□□□□□ -0.92
RN7SKP57-201ENST00000517248 CACNB1Q02641 598 aaPredicted RBP9.23□□□□□ -0.93
RN7SKP57-201ENST00000517248 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
RN7SKP57-201ENST00000517248 POTEHQ6S545 545 aa8.82□□□□□ -1
RN7SKP57-201ENST00000517248 ADRA2BP18089 450 aa8.75□□□□□ -1.01
RN7SKP57-201ENST00000517248 NISCHQ9Y2I1 1504 aa8.73□□□□□ -1.01
RN7SKP57-201ENST00000517248 ABCC9O60706 1549 aa8.45□□□□□ -1.06
RN7SKP57-201ENST00000517248 DMRT2Q9Y5R5 561 aa8.41□□□□□ -1.06
RN7SKP57-201ENST00000517248 RNF39Q9H2S5 420 aa8.4□□□□□ -1.06
RN7SKP57-201ENST00000517248 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
RN7SKP57-201ENST00000517248 DNAJC5BQ9UF47 199 aa8.39□□□□□ -1.07
RN7SKP57-201ENST00000517248 DCAF8L1A6NGE4 600 aa8.19□□□□□ -1.1
RN7SKP57-201ENST00000517248 C1QBPQ07021 282 aaKnown RBP8.19□□□□□ -1.1
RN7SKP57-201ENST00000517248 PLPPR3Q6T4P5 718 aa8.17□□□□□ -1.1
RN7SKP57-201ENST00000517248 DNAJC5Q9H3Z4 198 aa7.97□□□□□ -1.13
RN7SKP57-201ENST00000517248 CCDC180Q9P1Z9 1646 aa7.94□□□□□ -1.14
RN7SKP57-201ENST00000517248 SCAF1Q9H7N4 1312 aaKnown RBP7.9□□□□□ -1.14
RN7SKP57-201ENST00000517248 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
RN7SKP57-201ENST00000517248 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
RN7SKP57-201ENST00000517248 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
RN7SKP57-201ENST00000517248 SP7Q8TDD2 431 aaPredicted RBP7.76□□□□□ -1.17
RN7SKP57-201ENST00000517248 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
RN7SKP57-201ENST00000517248 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.18
RN7SKP57-201ENST00000517248 NACADO15069 1562 aa7.64□□□□□ -1.19
RN7SKP57-201ENST00000517248 CECR2Q9BXF3 1484 aa7.64□□□□□ -1.19
RN7SKP57-201ENST00000517248 UNC13AQ9UPW8 1703 aa7.63□□□□□ -1.19
RN7SKP57-201ENST00000517248 BICRAQ9NZM4 1560 aa7.63□□□□□ -1.19
RN7SKP57-201ENST00000517248 CC2D2AQ9P2K1 1620 aa7.59□□□□□ -1.19
RN7SKP57-201ENST00000517248 DSG3P32926 999 aa7.54□□□□□ -1.2
RN7SKP57-201ENST00000517248 CHRDL2Q6WN34 429 aa7.46□□□□□ -1.22
RN7SKP57-201ENST00000517248 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
RN7SKP57-201ENST00000517248 EIF4G1Q04637 1599 aaKnown RBP7.46□□□□□ -1.22
RN7SKP57-201ENST00000517248 CUX2O14529 1486 aa7.41□□□□□ -1.22
RN7SKP57-201ENST00000517248 MYO15BQ96JP2 1530 aa7.39□□□□□ -1.23
RN7SKP57-201ENST00000517248 SHROOM4Q9ULL8 1493 aa7.39□□□□□ -1.23
RN7SKP57-201ENST00000517248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.36□□□□□ -1.23
RN7SKP57-201ENST00000517248 CAPN15O75808 1086 aa7.35□□□□□ -1.23
RN7SKP57-201ENST00000517248 RNF216Q9NWF9 866 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP57-201ENST00000517248 SPINK5Q9NQ38 1064 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP57-201ENST00000517248 LHX8Q68G74 356 aa7.3□□□□□ -1.24
RN7SKP57-201ENST00000517248 ERCC6Q03468 1493 aa7.3□□□□□ -1.24
RN7SKP57-201ENST00000517248 SCRIBQ14160 1630 aa7.28□□□□□ -1.24
RN7SKP57-201ENST00000517248 HAX1O00165 279 aa7.26□□□□□ -1.25
RN7SKP57-201ENST00000517248 CNKSR2Q8WXI2 1034 aa7.15□□□□□ -1.26
RN7SKP57-201ENST00000517248 NESP48681 1621 aa7.15□□□□□ -1.27
RN7SKP57-201ENST00000517248 EVX2Q03828 476 aa7.14□□□□□ -1.27
RN7SKP57-201ENST00000517248 RBM42Q9BTD8 480 aaKnown RBP7.14□□□□□ -1.27
RN7SKP57-201ENST00000517248 DCAF1Q9Y4B6 1507 aa7.14□□□□□ -1.27
RN7SKP57-201ENST00000517248 ZCCHC6Q5VYS8 1495 aaKnown RBP7.12□□□□□ -1.27
RN7SKP57-201ENST00000517248 ABCB7O75027 752 aa7.11□□□□□ -1.27
RN7SKP57-201ENST00000517248 NCAPD3P42695 1498 aa7.11□□□□□ -1.27
RN7SKP57-201ENST00000517248 THOC2Q8NI27 1593 aaKnown RBP7.09□□□□□ -1.27
RN7SKP57-201ENST00000517248 PPP4R3CPQ6ZMV5 832 aa7.08□□□□□ -1.28
RN7SKP57-201ENST00000517248 OSCARQ8IYS5 282 aa7.08□□□□□ -1.28
RN7SKP57-201ENST00000517248 PIP4P2Q8N4L2 257 aa7.08□□□□□ -1.28
RN7SKP57-201ENST00000517248 U3KPZ7 1027 aaPredicted RBP7.08□□□□□ -1.28
RN7SKP57-201ENST00000517248 SMARCA2P51531 1590 aa7.03□□□□□ -1.28
RN7SKP57-201ENST00000517248 ATAD2BQ9ULI0 1458 aa7.03□□□□□ -1.28
RN7SKP57-201ENST00000517248 TRHP20396 242 aaPredicted RBP7□□□□□ -1.29
RN7SKP57-201ENST00000517248 KIF21AQ7Z4S6 1674 aa6.99□□□□□ -1.29
RN7SKP57-201ENST00000517248 BAZ1AQ9NRL2 1556 aaPredicted RBP6.99□□□□□ -1.29
RN7SKP57-201ENST00000517248 PDS5BQ9NTI5 1447 aa6.97□□□□□ -1.29
RN7SKP57-201ENST00000517248 RIMBP3CA6NJZ7 1639 aa6.97□□□□□ -1.29
RN7SKP57-201ENST00000517248 RIMBP3BA6NNM3 1639 aa6.97□□□□□ -1.29
RN7SKP57-201ENST00000517248 RIMBP3Q9UFD9 1639 aa6.97□□□□□ -1.29
RN7SKP57-201ENST00000517248 LAMC3Q9Y6N6 1575 aa6.96□□□□□ -1.29
RN7SKP57-201ENST00000517248 CYB5RLQ6IPT4 315 aa6.96□□□□□ -1.3
RN7SKP57-201ENST00000517248 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
RN7SKP57-201ENST00000517248 MRC2Q9UBG0 1479 aa6.92□□□□□ -1.3
RN7SKP57-201ENST00000517248 POTEMA6NI47 508 aa6.92□□□□□ -1.3
RN7SKP57-201ENST00000517248 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
RN7SKP57-201ENST00000517248 ARHGEF11O15085 1522 aa6.91□□□□□ -1.3
RN7SKP57-201ENST00000517248 WDR62O43379 1518 aa6.91□□□□□ -1.3
RN7SKP57-201ENST00000517248 ILDR1Q86SU0 546 aaPredicted RBP6.9□□□□□ -1.3
RN7SKP57-201ENST00000517248 CADPSQ9ULU8 1353 aa6.88□□□□□ -1.31
RN7SKP57-201ENST00000517248 SMARCA4P51532 1647 aa6.87□□□□□ -1.31
RN7SKP57-201ENST00000517248 GABBR2O75899 941 aa6.87□□□□□ -1.31
RN7SKP57-201ENST00000517248 POTEGQ6S5H5 508 aa6.87□□□□□ -1.31
RN7SKP57-201ENST00000517248 FXR2P51116 673 aaKnown RBP eCLIP6.85□□□□□ -1.31
RN7SKP57-201ENST00000517248 ZNF219Q9P2Y4 722 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP57-201ENST00000517248 ARAP1Q96P48 1450 aa6.82□□□□□ -1.32
RN7SKP57-201ENST00000517248 CEP164Q9UPV0 1460 aa6.81□□□□□ -1.32
RN7SKP57-201ENST00000517248 PEG3Q9GZU2 1588 aa6.8□□□□□ -1.32
RN7SKP57-201ENST00000517248 PCDH10Q9P2E7 1040 aa6.8□□□□□ -1.32
RN7SKP57-201ENST00000517248 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
RN7SKP57-201ENST00000517248 FANCD2Q9BXW9 1451 aa6.79□□□□□ -1.32
RN7SKP57-201ENST00000517248 REM2Q8IYK8 340 aaPredicted RBP6.78□□□□□ -1.32
RN7SKP57-201ENST00000517248 URB2Q14146 1524 aaKnown RBP6.76□□□□□ -1.33
RN7SKP57-201ENST00000517248 ZNF608Q9ULD9 1512 aaPredicted RBP6.76□□□□□ -1.33
RN7SKP57-201ENST00000517248 MROH2BQ7Z745 1585 aa6.74□□□□□ -1.33
RN7SKP57-201ENST00000517248 POTEIP0CG38 1075 aa6.74□□□□□ -1.33
RN7SKP57-201ENST00000517248 FBLN2P98095 1184 aa6.73□□□□□ -1.33
RN7SKP57-201ENST00000517248 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms