RNA–Protein interactions for RNA: ENST00000515013.5

PRDM8-210, Transcript of PR/SET domain 8, humanhuman

TSL 1 (best)

Gene PRDM8, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-210ENST00000515013 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
PRDM8-210ENST00000515013 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
PRDM8-210ENST00000515013 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
PRDM8-210ENST00000515013 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
PRDM8-210ENST00000515013 HRCP23327 699 aa35.26■■■■□ 3.24
PRDM8-210ENST00000515013 SUPT5HO00267 1087 aaKnown RBP35.16■■■■□ 3.22
PRDM8-210ENST00000515013 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
PRDM8-210ENST00000515013 MYO15BQ96JP2 1530 aa34.49■■■■□ 3.11
PRDM8-210ENST00000515013 PCGF6Q9BYE7 350 aa34.47■■■■□ 3.11
PRDM8-210ENST00000515013 PPARGC1BQ86YN6 1023 aaKnown RBP34.42■■■■□ 3.1
PRDM8-210ENST00000515013 CHIC1Q5VXU3 224 aa34.29■■■■□ 3.08
PRDM8-210ENST00000515013 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.07
PRDM8-210ENST00000515013 PELP1Q8IZL8 1130 aaKnown RBP33.96■■■■□ 3.03
PRDM8-210ENST00000515013 SCRIBQ14160 1630 aa33.55■■■□□ 2.96
PRDM8-210ENST00000515013 TRIM26Q12899 539 aaPredicted RBP33.47■■■□□ 2.95
PRDM8-210ENST00000515013 LOC105371045A0A1W2PR82 267 aa33.41■■■□□ 2.94
PRDM8-210ENST00000515013 ABCC9O60706 1549 aa33.37■■■□□ 2.93
PRDM8-210ENST00000515013 SCAF1Q9H7N4 1312 aaKnown RBP33.28■■■□□ 2.92
PRDM8-210ENST00000515013 ZEB1P37275 1124 aaPredicted RBP33.23■■■□□ 2.91
PRDM8-210ENST00000515013 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
PRDM8-210ENST00000515013 NACADO15069 1562 aa32.91■■■□□ 2.86
PRDM8-210ENST00000515013 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
PRDM8-210ENST00000515013 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
PRDM8-210ENST00000515013 MROH2BQ7Z745 1585 aa32.68■■■□□ 2.82
PRDM8-210ENST00000515013 MYT1Q01538 1121 aa32.63■■■□□ 2.81
PRDM8-210ENST00000515013 TRIM41Q8WV44 630 aa32.63■■■□□ 2.81
PRDM8-210ENST00000515013 FAM9AQ8IZU1 332 aaPredicted RBP32.55■■■□□ 2.8
PRDM8-210ENST00000515013 ACIN1Q9UKV3 1341 aaKnown RBP32.52■■■□□ 2.8
PRDM8-210ENST00000515013 WIZO95785 1651 aa32.51■■■□□ 2.79
PRDM8-210ENST00000515013 EHMT2Q96KQ7 1210 aa32.42■■■□□ 2.78
PRDM8-210ENST00000515013 NEUROD1Q13562 356 aa32.39■■■□□ 2.78
PRDM8-210ENST00000515013 GTF3C3Q9Y5Q9 886 aa32.19■■■□□ 2.74
PRDM8-210ENST00000515013 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
PRDM8-210ENST00000515013 CENPBP07199 599 aaPredicted RBP32.1■■■□□ 2.73
PRDM8-210ENST00000515013 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
PRDM8-210ENST00000515013 DIEXFQ68CQ4 756 aaKnown RBP31.97■■■□□ 2.71
PRDM8-210ENST00000515013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.97■■■□□ 2.71
PRDM8-210ENST00000515013 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
PRDM8-210ENST00000515013 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
PRDM8-210ENST00000515013 CCER1Q8TC90 406 aaPredicted RBP31.93■■■□□ 2.7
PRDM8-210ENST00000515013 EIF4G1Q04637 1599 aaKnown RBP31.91■■■□□ 2.7
PRDM8-210ENST00000515013 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
PRDM8-210ENST00000515013 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
PRDM8-210ENST00000515013 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
PRDM8-210ENST00000515013 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
PRDM8-210ENST00000515013 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
PRDM8-210ENST00000515013 SOGA1O94964 1423 aa31.47■■■□□ 2.63
PRDM8-210ENST00000515013 ZNF316A6NFI3 1004 aaPredicted RBP31.4■■■□□ 2.62
PRDM8-210ENST00000515013 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
PRDM8-210ENST00000515013 YTHDC1Q96MU7 727 aaKnown RBP31.34■■■□□ 2.61
PRDM8-210ENST00000515013 TTBK1Q5TCY1 1321 aaPredicted RBP31.31■■■□□ 2.6
PRDM8-210ENST00000515013 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
PRDM8-210ENST00000515013 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
PRDM8-210ENST00000515013 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
PRDM8-210ENST00000515013 CEP162Q5TB80 1403 aa31.18■■■□□ 2.58
PRDM8-210ENST00000515013 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
PRDM8-210ENST00000515013 MIER1Q8N108 512 aa31.15■■■□□ 2.58
PRDM8-210ENST00000515013 UBTFP17480 764 aaKnown RBP31.14■■■□□ 2.57
PRDM8-210ENST00000515013 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
PRDM8-210ENST00000515013 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
PRDM8-210ENST00000515013 TNIKQ9UKE5 1360 aa31.05■■■□□ 2.56
PRDM8-210ENST00000515013 EEA1Q15075 1411 aa30.99■■■□□ 2.55
PRDM8-210ENST00000515013 GOLGA3Q08378 1498 aa30.9■■■□□ 2.54
PRDM8-210ENST00000515013 RANGAP1P46060 587 aaPredicted RBP30.76■■■□□ 2.51
PRDM8-210ENST00000515013 CLSPNQ9HAW4 1339 aa30.76■■■□□ 2.51
PRDM8-210ENST00000515013 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
PRDM8-210ENST00000515013 SUPT16HQ9Y5B9 1047 aaKnown RBP30.7■■■□□ 2.51
PRDM8-210ENST00000515013 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
PRDM8-210ENST00000515013 KIF21BO75037 1637 aa30.65■■■□□ 2.5
PRDM8-210ENST00000515013 CLIP1P30622 1438 aa30.61■■■□□ 2.49
PRDM8-210ENST00000515013 ANP32EQ9BTT0 268 aa30.61■■■□□ 2.49
PRDM8-210ENST00000515013 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
PRDM8-210ENST00000515013 TOP2BQ02880 1626 aa30.57■■■□□ 2.48
PRDM8-210ENST00000515013 TSHZ2Q9NRE2 1034 aa30.56■■■□□ 2.48
PRDM8-210ENST00000515013 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
PRDM8-210ENST00000515013 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
PRDM8-210ENST00000515013 BCL11AQ9H165 835 aa30.45■■■□□ 2.46
PRDM8-210ENST00000515013 BIVM-ERCC5R4GMW8 1640 aa30.43■■■□□ 2.46
PRDM8-210ENST00000515013 VPS8Q8N3P4 1428 aa30.42■■■□□ 2.46
PRDM8-210ENST00000515013 CUX1P39880 1505 aa30.4■■■□□ 2.46
PRDM8-210ENST00000515013 APLP2Q06481 763 aa30.29■■■□□ 2.44
PRDM8-210ENST00000515013 CFTRP13569 1480 aa30.28■■■□□ 2.44
PRDM8-210ENST00000515013 PRXQ9BXM0 1461 aa30.27■■■□□ 2.44
PRDM8-210ENST00000515013 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
PRDM8-210ENST00000515013 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
PRDM8-210ENST00000515013 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
PRDM8-210ENST00000515013 DHX57Q6P158 1386 aaKnown RBP30.11■■■□□ 2.41
PRDM8-210ENST00000515013 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
PRDM8-210ENST00000515013 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
PRDM8-210ENST00000515013 CUX2O14529 1486 aa29.98■■■□□ 2.39
PRDM8-210ENST00000515013 BCANQ96GW7 911 aa29.94■■■□□ 2.38
PRDM8-210ENST00000515013 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
PRDM8-210ENST00000515013 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
PRDM8-210ENST00000515013 IGF1RP08069 1367 aa29.92■■■□□ 2.38
PRDM8-210ENST00000515013 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
PRDM8-210ENST00000515013 KCNH8Q96L42 1107 aa29.9■■■□□ 2.38
PRDM8-210ENST00000515013 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
PRDM8-210ENST00000515013 FKBP8Q14318 412 aa29.87■■■□□ 2.37
PRDM8-210ENST00000515013 RBM19Q9Y4C8 960 aaKnown RBP29.84■■■□□ 2.37
PRDM8-210ENST00000515013 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms