RNA–Protein interactions for RNA: ENST00000513116.1

STMN1-209, Transcript of stathmin 1, humanhuman

TSL 2

Gene STMN1, Length 1,783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STMN1-209ENST00000513116 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
STMN1-209ENST00000513116 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
STMN1-209ENST00000513116 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
STMN1-209ENST00000513116 MYT1Q01538 1121 aa18.87■□□□□ 0.61
STMN1-209ENST00000513116 ABCC9O60706 1549 aa18.44■□□□□ 0.54
STMN1-209ENST00000513116 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
STMN1-209ENST00000513116 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
STMN1-209ENST00000513116 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
STMN1-209ENST00000513116 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
STMN1-209ENST00000513116 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
STMN1-209ENST00000513116 NACADO15069 1562 aa17.97■□□□□ 0.47
STMN1-209ENST00000513116 HRCP23327 699 aa17.91■□□□□ 0.46
STMN1-209ENST00000513116 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
STMN1-209ENST00000513116 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
STMN1-209ENST00000513116 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
STMN1-209ENST00000513116 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
STMN1-209ENST00000513116 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
STMN1-209ENST00000513116 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
STMN1-209ENST00000513116 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
STMN1-209ENST00000513116 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
STMN1-209ENST00000513116 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
STMN1-209ENST00000513116 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
STMN1-209ENST00000513116 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
STMN1-209ENST00000513116 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
STMN1-209ENST00000513116 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
STMN1-209ENST00000513116 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
STMN1-209ENST00000513116 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
STMN1-209ENST00000513116 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
STMN1-209ENST00000513116 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.27
STMN1-209ENST00000513116 APLP2Q06481 763 aa16.76■□□□□ 0.27
STMN1-209ENST00000513116 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
STMN1-209ENST00000513116 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
STMN1-209ENST00000513116 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
STMN1-209ENST00000513116 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
STMN1-209ENST00000513116 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
STMN1-209ENST00000513116 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
STMN1-209ENST00000513116 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
STMN1-209ENST00000513116 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
STMN1-209ENST00000513116 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
STMN1-209ENST00000513116 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
STMN1-209ENST00000513116 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
STMN1-209ENST00000513116 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
STMN1-209ENST00000513116 WIZO95785 1651 aa16.49■□□□□ 0.23
STMN1-209ENST00000513116 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
STMN1-209ENST00000513116 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
STMN1-209ENST00000513116 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
STMN1-209ENST00000513116 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
STMN1-209ENST00000513116 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
STMN1-209ENST00000513116 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
STMN1-209ENST00000513116 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
STMN1-209ENST00000513116 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
STMN1-209ENST00000513116 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
STMN1-209ENST00000513116 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
STMN1-209ENST00000513116 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
STMN1-209ENST00000513116 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
STMN1-209ENST00000513116 CFTRP13569 1480 aa16.09■□□□□ 0.17
STMN1-209ENST00000513116 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
STMN1-209ENST00000513116 NESP48681 1621 aa16.03■□□□□ 0.16
STMN1-209ENST00000513116 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
STMN1-209ENST00000513116 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
STMN1-209ENST00000513116 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
STMN1-209ENST00000513116 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
STMN1-209ENST00000513116 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
STMN1-209ENST00000513116 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
STMN1-209ENST00000513116 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
STMN1-209ENST00000513116 DAXXQ9UER7 740 aaPredicted RBP15.85■□□□□ 0.13
STMN1-209ENST00000513116 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.13
STMN1-209ENST00000513116 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
STMN1-209ENST00000513116 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
STMN1-209ENST00000513116 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
STMN1-209ENST00000513116 UBE2Q2Q8WVN8 375 aa15.75■□□□□ 0.11
STMN1-209ENST00000513116 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
STMN1-209ENST00000513116 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
STMN1-209ENST00000513116 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
STMN1-209ENST00000513116 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.1
STMN1-209ENST00000513116 WDR62O43379 1518 aa15.7■□□□□ 0.1
STMN1-209ENST00000513116 ERICH6BQ5W0A0 696 aa15.69■□□□□ 0.1
STMN1-209ENST00000513116 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
STMN1-209ENST00000513116 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
STMN1-209ENST00000513116 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
STMN1-209ENST00000513116 CUX2O14529 1486 aa15.66■□□□□ 0.1
STMN1-209ENST00000513116 CUX1P39880 1505 aa15.64■□□□□ 0.09
STMN1-209ENST00000513116 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
STMN1-209ENST00000513116 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
STMN1-209ENST00000513116 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
STMN1-209ENST00000513116 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
STMN1-209ENST00000513116 SYNJ1O43426 1573 aa15.55■□□□□ 0.08
STMN1-209ENST00000513116 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
STMN1-209ENST00000513116 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
STMN1-209ENST00000513116 SOGA1O94964 1423 aa15.54■□□□□ 0.08
STMN1-209ENST00000513116 EEA1Q15075 1411 aa15.54■□□□□ 0.08
STMN1-209ENST00000513116 SUPT16HQ9Y5B9 1047 aaKnown RBP15.54■□□□□ 0.08
STMN1-209ENST00000513116 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
STMN1-209ENST00000513116 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
STMN1-209ENST00000513116 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
STMN1-209ENST00000513116 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
STMN1-209ENST00000513116 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
STMN1-209ENST00000513116 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
STMN1-209ENST00000513116 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
STMN1-209ENST00000513116 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms