RNA–Protein interactions for RNA: ENST00000512847.1

ALPK1-215, Transcript of alpha kinase 1, humanhuman

TSL 3

Gene ALPK1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-215ENST00000512847 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
ALPK1-215ENST00000512847 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
ALPK1-215ENST00000512847 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
ALPK1-215ENST00000512847 PHF23Q9BUL5 403 aaPredicted RBP29.64■■■□□ 2.34
ALPK1-215ENST00000512847 FOXD1Q16676 465 aa27.85■■■□□ 2.05
ALPK1-215ENST00000512847 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
ALPK1-215ENST00000512847 PLPPR3Q6T4P5 718 aa27.21■■□□□ 1.95
ALPK1-215ENST00000512847 PIAS4Q8N2W9 510 aaPredicted RBP26.21■■□□□ 1.79
ALPK1-215ENST00000512847 MSH5O43196 834 aa26.18■■□□□ 1.78
ALPK1-215ENST00000512847 PPP6R1Q9UPN7 881 aa26.18■■□□□ 1.78
ALPK1-215ENST00000512847 ADRA2BP18089 450 aa26.16■■□□□ 1.78
ALPK1-215ENST00000512847 POTEDQ86YR6 584 aa25.52■■□□□ 1.68
ALPK1-215ENST00000512847 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
ALPK1-215ENST00000512847 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
ALPK1-215ENST00000512847 MAPK8IP2Q13387 824 aaPredicted RBP23.88■■□□□ 1.41
ALPK1-215ENST00000512847 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
ALPK1-215ENST00000512847 PPP4R3CPQ6ZMV5 832 aa23.79■■□□□ 1.4
ALPK1-215ENST00000512847 ABCC9O60706 1549 aa23.78■■□□□ 1.4
ALPK1-215ENST00000512847 CNKSR2Q8WXI2 1034 aa23.36■■□□□ 1.33
ALPK1-215ENST00000512847 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
ALPK1-215ENST00000512847 HOXD11P31277 338 aaPredicted RBP23.11■■□□□ 1.29
ALPK1-215ENST00000512847 RNF216Q9NWF9 866 aaPredicted RBP23.07■■□□□ 1.28
ALPK1-215ENST00000512847 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
ALPK1-215ENST00000512847 DCAF8L1A6NGE4 600 aa22.87■■□□□ 1.25
ALPK1-215ENST00000512847 NACADO15069 1562 aa22.81■■□□□ 1.24
ALPK1-215ENST00000512847 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
ALPK1-215ENST00000512847 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
ALPK1-215ENST00000512847 MYO15BQ96JP2 1530 aa22.63■■□□□ 1.21
ALPK1-215ENST00000512847 NPM3O75607 178 aaKnown RBP22.6■■□□□ 1.21
ALPK1-215ENST00000512847 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.19
ALPK1-215ENST00000512847 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
ALPK1-215ENST00000512847 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
ALPK1-215ENST00000512847 KCNA4P22459 653 aa22.39■■□□□ 1.17
ALPK1-215ENST00000512847 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
ALPK1-215ENST00000512847 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.14
ALPK1-215ENST00000512847 CACNB1Q02641 598 aaPredicted RBP22.19■■□□□ 1.14
ALPK1-215ENST00000512847 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
ALPK1-215ENST00000512847 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
ALPK1-215ENST00000512847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
ALPK1-215ENST00000512847 C1QBPQ07021 282 aaKnown RBP22.04■■□□□ 1.12
ALPK1-215ENST00000512847 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
ALPK1-215ENST00000512847 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
ALPK1-215ENST00000512847 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
ALPK1-215ENST00000512847 U3KPZ7 1027 aaPredicted RBP21.52■■□□□ 1.04
ALPK1-215ENST00000512847 SLC4A2P04920 1241 aa21.44■■□□□ 1.02
ALPK1-215ENST00000512847 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
ALPK1-215ENST00000512847 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
ALPK1-215ENST00000512847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
ALPK1-215ENST00000512847 APLP2Q06481 763 aa21.3■■□□□ 1
ALPK1-215ENST00000512847 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
ALPK1-215ENST00000512847 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
ALPK1-215ENST00000512847 CAPN15O75808 1086 aa21.15■□□□□ 0.98
ALPK1-215ENST00000512847 SAMD1Q6SPF0 538 aaPredicted RBP21.13■□□□□ 0.97
ALPK1-215ENST00000512847 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
ALPK1-215ENST00000512847 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
ALPK1-215ENST00000512847 MYCNP04198 464 aaPredicted RBP21.04■□□□□ 0.96
ALPK1-215ENST00000512847 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
ALPK1-215ENST00000512847 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
ALPK1-215ENST00000512847 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
ALPK1-215ENST00000512847 ZNF219Q9P2Y4 722 aaPredicted RBP20.98■□□□□ 0.95
ALPK1-215ENST00000512847 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
ALPK1-215ENST00000512847 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
ALPK1-215ENST00000512847 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
ALPK1-215ENST00000512847 FOXD4L1Q9NU39 408 aa20.94■□□□□ 0.94
ALPK1-215ENST00000512847 DSG3P32926 999 aa20.9■□□□□ 0.94
ALPK1-215ENST00000512847 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
ALPK1-215ENST00000512847 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
ALPK1-215ENST00000512847 WIZO95785 1651 aa20.8■□□□□ 0.92
ALPK1-215ENST00000512847 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
ALPK1-215ENST00000512847 ABCB7O75027 752 aa20.59■□□□□ 0.89
ALPK1-215ENST00000512847 NESP48681 1621 aa20.56■□□□□ 0.88
ALPK1-215ENST00000512847 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
ALPK1-215ENST00000512847 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
ALPK1-215ENST00000512847 ZBTB22O15209 634 aa20.51■□□□□ 0.87
ALPK1-215ENST00000512847 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
ALPK1-215ENST00000512847 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
ALPK1-215ENST00000512847 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
ALPK1-215ENST00000512847 ATXN8OSP0DMR3 200 aa20.37■□□□□ 0.85
ALPK1-215ENST00000512847 POLA2Q14181 598 aa20.36■□□□□ 0.85
ALPK1-215ENST00000512847 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
ALPK1-215ENST00000512847 CUX2O14529 1486 aa20.32■□□□□ 0.84
ALPK1-215ENST00000512847 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
ALPK1-215ENST00000512847 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
ALPK1-215ENST00000512847 CFTRP13569 1480 aa20.27■□□□□ 0.84
ALPK1-215ENST00000512847 PRDM2Q13029 1718 aa20.27■□□□□ 0.83
ALPK1-215ENST00000512847 ATF5Q9Y2D1 282 aaPredicted RBP20.26■□□□□ 0.83
ALPK1-215ENST00000512847 ZBTB12Q9Y330 459 aaPredicted RBP20.2■□□□□ 0.82
ALPK1-215ENST00000512847 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
ALPK1-215ENST00000512847 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
ALPK1-215ENST00000512847 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
ALPK1-215ENST00000512847 RBM42Q9BTD8 480 aaKnown RBP20.15■□□□□ 0.82
ALPK1-215ENST00000512847 WDR62O43379 1518 aa20.12■□□□□ 0.81
ALPK1-215ENST00000512847 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
ALPK1-215ENST00000512847 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
ALPK1-215ENST00000512847 POTEHQ6S545 545 aa19.9■□□□□ 0.78
ALPK1-215ENST00000512847 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
ALPK1-215ENST00000512847 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
ALPK1-215ENST00000512847 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
ALPK1-215ENST00000512847 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
ALPK1-215ENST00000512847 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms