RNA–Protein interactions for RNA: ENST00000512587.1

TROVE2-212, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-212ENST00000512587 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
TROVE2-212ENST00000512587 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
TROVE2-212ENST00000512587 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
TROVE2-212ENST00000512587 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
TROVE2-212ENST00000512587 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
TROVE2-212ENST00000512587 FOXD1Q16676 465 aa20.32■□□□□ 0.84
TROVE2-212ENST00000512587 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
TROVE2-212ENST00000512587 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
TROVE2-212ENST00000512587 ADRA2BP18089 450 aa19.13■□□□□ 0.65
TROVE2-212ENST00000512587 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
TROVE2-212ENST00000512587 MSH5O43196 834 aa19.03■□□□□ 0.64
TROVE2-212ENST00000512587 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
TROVE2-212ENST00000512587 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
TROVE2-212ENST00000512587 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
TROVE2-212ENST00000512587 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
TROVE2-212ENST00000512587 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
TROVE2-212ENST00000512587 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
TROVE2-212ENST00000512587 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
TROVE2-212ENST00000512587 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
TROVE2-212ENST00000512587 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
TROVE2-212ENST00000512587 ABCC9O60706 1549 aa17.04■□□□□ 0.32
TROVE2-212ENST00000512587 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
TROVE2-212ENST00000512587 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
TROVE2-212ENST00000512587 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
TROVE2-212ENST00000512587 DCAF1Q9Y4B6 1507 aa16.88■□□□□ 0.29
TROVE2-212ENST00000512587 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
TROVE2-212ENST00000512587 NACADO15069 1562 aa16.69■□□□□ 0.26
TROVE2-212ENST00000512587 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
TROVE2-212ENST00000512587 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
TROVE2-212ENST00000512587 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
TROVE2-212ENST00000512587 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
TROVE2-212ENST00000512587 KCNA4P22459 653 aa16.57■□□□□ 0.24
TROVE2-212ENST00000512587 SCRIBQ14160 1630 aa16.47■□□□□ 0.23
TROVE2-212ENST00000512587 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
TROVE2-212ENST00000512587 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
TROVE2-212ENST00000512587 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
TROVE2-212ENST00000512587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
TROVE2-212ENST00000512587 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
TROVE2-212ENST00000512587 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
TROVE2-212ENST00000512587 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
TROVE2-212ENST00000512587 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
TROVE2-212ENST00000512587 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
TROVE2-212ENST00000512587 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
TROVE2-212ENST00000512587 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
TROVE2-212ENST00000512587 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
TROVE2-212ENST00000512587 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
TROVE2-212ENST00000512587 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
TROVE2-212ENST00000512587 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
TROVE2-212ENST00000512587 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
TROVE2-212ENST00000512587 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
TROVE2-212ENST00000512587 WIZO95785 1651 aa15.7■□□□□ 0.1
TROVE2-212ENST00000512587 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
TROVE2-212ENST00000512587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
TROVE2-212ENST00000512587 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
TROVE2-212ENST00000512587 APLP2Q06481 763 aa15.56■□□□□ 0.08
TROVE2-212ENST00000512587 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
TROVE2-212ENST00000512587 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
TROVE2-212ENST00000512587 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
TROVE2-212ENST00000512587 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
TROVE2-212ENST00000512587 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
TROVE2-212ENST00000512587 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
TROVE2-212ENST00000512587 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
TROVE2-212ENST00000512587 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
TROVE2-212ENST00000512587 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
TROVE2-212ENST00000512587 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
TROVE2-212ENST00000512587 CAPN15O75808 1086 aa15.38■□□□□ 0.05
TROVE2-212ENST00000512587 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
TROVE2-212ENST00000512587 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
TROVE2-212ENST00000512587 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
TROVE2-212ENST00000512587 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
TROVE2-212ENST00000512587 DSG3P32926 999 aa15.25■□□□□ 0.03
TROVE2-212ENST00000512587 ZBTB22O15209 634 aa15.23■□□□□ 0.03
TROVE2-212ENST00000512587 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
TROVE2-212ENST00000512587 TRIM41Q8WV44 630 aa15.08■□□□□ 0
TROVE2-212ENST00000512587 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
TROVE2-212ENST00000512587 ABCB7O75027 752 aa15.01□□□□□ -0.01
TROVE2-212ENST00000512587 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
TROVE2-212ENST00000512587 CFTRP13569 1480 aa15.01□□□□□ -0.01
TROVE2-212ENST00000512587 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
TROVE2-212ENST00000512587 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
TROVE2-212ENST00000512587 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
TROVE2-212ENST00000512587 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
TROVE2-212ENST00000512587 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
TROVE2-212ENST00000512587 NESP48681 1621 aa14.9□□□□□ -0.02
TROVE2-212ENST00000512587 POLA2Q14181 598 aa14.87□□□□□ -0.03
TROVE2-212ENST00000512587 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
TROVE2-212ENST00000512587 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
TROVE2-212ENST00000512587 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
TROVE2-212ENST00000512587 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
TROVE2-212ENST00000512587 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
TROVE2-212ENST00000512587 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
TROVE2-212ENST00000512587 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
TROVE2-212ENST00000512587 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
TROVE2-212ENST00000512587 CUX1P39880 1505 aa14.78□□□□□ -0.04
TROVE2-212ENST00000512587 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
TROVE2-212ENST00000512587 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
TROVE2-212ENST00000512587 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
TROVE2-212ENST00000512587 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
TROVE2-212ENST00000512587 SOGA1O94964 1423 aa14.69□□□□□ -0.06
TROVE2-212ENST00000512587 LOC105371045A0A1W2PR82 267 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms