RNA–Protein interactions for RNA: ENST00000512509.5

GPM6A-216, Transcript of glycoprotein M6A, humanhuman

TSL 4

Gene GPM6A, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-216ENST00000512509 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
GPM6A-216ENST00000512509 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
GPM6A-216ENST00000512509 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
GPM6A-216ENST00000512509 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
GPM6A-216ENST00000512509 FOXD1Q16676 465 aa19.3■□□□□ 0.68
GPM6A-216ENST00000512509 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
GPM6A-216ENST00000512509 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
GPM6A-216ENST00000512509 ABCC9O60706 1549 aa18.45■□□□□ 0.54
GPM6A-216ENST00000512509 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
GPM6A-216ENST00000512509 ADRA2BP18089 450 aa18.32■□□□□ 0.52
GPM6A-216ENST00000512509 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
GPM6A-216ENST00000512509 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
GPM6A-216ENST00000512509 MSH5O43196 834 aa17.81■□□□□ 0.44
GPM6A-216ENST00000512509 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
GPM6A-216ENST00000512509 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
GPM6A-216ENST00000512509 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
GPM6A-216ENST00000512509 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
GPM6A-216ENST00000512509 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
GPM6A-216ENST00000512509 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
GPM6A-216ENST00000512509 NACADO15069 1562 aa16.81■□□□□ 0.28
GPM6A-216ENST00000512509 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
GPM6A-216ENST00000512509 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
GPM6A-216ENST00000512509 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
GPM6A-216ENST00000512509 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
GPM6A-216ENST00000512509 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
GPM6A-216ENST00000512509 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
GPM6A-216ENST00000512509 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
GPM6A-216ENST00000512509 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
GPM6A-216ENST00000512509 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
GPM6A-216ENST00000512509 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
GPM6A-216ENST00000512509 CUX2O14529 1486 aa16.29■□□□□ 0.2
GPM6A-216ENST00000512509 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
GPM6A-216ENST00000512509 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
GPM6A-216ENST00000512509 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
GPM6A-216ENST00000512509 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
GPM6A-216ENST00000512509 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
GPM6A-216ENST00000512509 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
GPM6A-216ENST00000512509 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
GPM6A-216ENST00000512509 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
GPM6A-216ENST00000512509 KCNA4P22459 653 aa15.92■□□□□ 0.14
GPM6A-216ENST00000512509 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
GPM6A-216ENST00000512509 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
GPM6A-216ENST00000512509 DCAF1Q9Y4B6 1507 aa15.71■□□□□ 0.11
GPM6A-216ENST00000512509 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
GPM6A-216ENST00000512509 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
GPM6A-216ENST00000512509 NESP48681 1621 aa15.58■□□□□ 0.09
GPM6A-216ENST00000512509 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
GPM6A-216ENST00000512509 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
GPM6A-216ENST00000512509 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
GPM6A-216ENST00000512509 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
GPM6A-216ENST00000512509 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
GPM6A-216ENST00000512509 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
GPM6A-216ENST00000512509 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
GPM6A-216ENST00000512509 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
GPM6A-216ENST00000512509 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
GPM6A-216ENST00000512509 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
GPM6A-216ENST00000512509 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
GPM6A-216ENST00000512509 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
GPM6A-216ENST00000512509 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.04
GPM6A-216ENST00000512509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
GPM6A-216ENST00000512509 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
GPM6A-216ENST00000512509 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
GPM6A-216ENST00000512509 WDR62O43379 1518 aa15.19■□□□□ 0.02
GPM6A-216ENST00000512509 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
GPM6A-216ENST00000512509 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
GPM6A-216ENST00000512509 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
GPM6A-216ENST00000512509 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
GPM6A-216ENST00000512509 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
GPM6A-216ENST00000512509 CYB5RLQ6IPT4 315 aa15.09■□□□□ 0.01
GPM6A-216ENST00000512509 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
GPM6A-216ENST00000512509 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
GPM6A-216ENST00000512509 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
GPM6A-216ENST00000512509 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
GPM6A-216ENST00000512509 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
GPM6A-216ENST00000512509 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
GPM6A-216ENST00000512509 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
GPM6A-216ENST00000512509 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
GPM6A-216ENST00000512509 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
GPM6A-216ENST00000512509 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
GPM6A-216ENST00000512509 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
GPM6A-216ENST00000512509 ZNF608Q9ULD9 1512 aaPredicted RBP14.75□□□□□ -0.05
GPM6A-216ENST00000512509 CHD1O14646 1710 aa14.75□□□□□ -0.05
GPM6A-216ENST00000512509 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
GPM6A-216ENST00000512509 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
GPM6A-216ENST00000512509 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
GPM6A-216ENST00000512509 ZBTB22O15209 634 aa14.68□□□□□ -0.06
GPM6A-216ENST00000512509 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
GPM6A-216ENST00000512509 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
GPM6A-216ENST00000512509 CFTRP13569 1480 aa14.63□□□□□ -0.07
GPM6A-216ENST00000512509 CAPN15O75808 1086 aa14.63□□□□□ -0.07
GPM6A-216ENST00000512509 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
GPM6A-216ENST00000512509 FBLN2P98095 1184 aa14.6□□□□□ -0.07
GPM6A-216ENST00000512509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
GPM6A-216ENST00000512509 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
GPM6A-216ENST00000512509 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
GPM6A-216ENST00000512509 WIZO95785 1651 aa14.51□□□□□ -0.09
GPM6A-216ENST00000512509 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
GPM6A-216ENST00000512509 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
GPM6A-216ENST00000512509 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
GPM6A-216ENST00000512509 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms