RNA–Protein interactions for RNA: ENST00000512311.5

MTRR-222, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, human

TSL 3

Gene MTRR, Length 386 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTRR-222	ENST00000512311	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.34	■□□□□ 0.21
MTRR-222	ENST00000512311	CHIC1	Q5VXU3	224 aa		15.61	■□□□□ 0.09
MTRR-222	ENST00000512311	NISCH	Q9Y2I1	1504 aa		14.46	□□□□□ -0.1
MTRR-222	ENST00000512311	PHF23	Q9BUL5	403 aa	Predicted RBP	13.8	□□□□□ -0.2
MTRR-222	ENST00000512311	SENP3	Q9H4L4	574 aa	Predicted RBP	13.74	□□□□□ -0.21
MTRR-222	ENST00000512311	FOXD1	Q16676	465 aa		12.89	□□□□□ -0.35
MTRR-222	ENST00000512311	CCDC180	Q9P1Z9	1646 aa		12.5	□□□□□ -0.41
MTRR-222	ENST00000512311	PLPPR3	Q6T4P5	718 aa		12.49	□□□□□ -0.41
MTRR-222	ENST00000512311	PPP6R1	Q9UPN7	881 aa		12.27	□□□□□ -0.45
MTRR-222	ENST00000512311	ADRA2B	P18089	450 aa		12.18	□□□□□ -0.46
MTRR-222	ENST00000512311	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.14	□□□□□ -0.47
MTRR-222	ENST00000512311	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.99	□□□□□ -0.49
MTRR-222	ENST00000512311	DCAF1	Q9Y4B6	1507 aa		11.99	□□□□□ -0.49
MTRR-222	ENST00000512311	MSH5	O43196	834 aa		11.84	□□□□□ -0.51
MTRR-222	ENST00000512311	DCAF8L2	P0C7V8	631 aa		11.84	□□□□□ -0.51
MTRR-222	ENST00000512311	MYO15B	Q96JP2	1530 aa		11.81	□□□□□ -0.52
MTRR-222	ENST00000512311	SHROOM4	Q9ULL8	1493 aa		11.79	□□□□□ -0.52
MTRR-222	ENST00000512311	ABCC9	O60706	1549 aa		11.7	□□□□□ -0.54
MTRR-222	ENST00000512311	NACAD	O15069	1562 aa		11.66	□□□□□ -0.54
MTRR-222	ENST00000512311	RB1CC1	Q8TDY2	1594 aa		11.49	□□□□□ -0.57
MTRR-222	ENST00000512311	SCRIB	Q14160	1630 aa		11.46	□□□□□ -0.57
MTRR-222	ENST00000512311	SUPT5H	O00267	1087 aa	Known RBP	11.44	□□□□□ -0.58
MTRR-222	ENST00000512311	POTED	Q86YR6	584 aa		11.33	□□□□□ -0.6
MTRR-222	ENST00000512311	RSF1	Q96T23	1441 aa	Predicted RBP	11.27	□□□□□ -0.6
MTRR-222	ENST00000512311	CECR2	Q9BXF3	1484 aa		11.21	□□□□□ -0.61
MTRR-222	ENST00000512311	UNC13A	Q9UPW8	1703 aa		11.21	□□□□□ -0.62
MTRR-222	ENST00000512311	BICRA	Q9NZM4	1560 aa		11.17	□□□□□ -0.62
MTRR-222	ENST00000512311	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.17	□□□□□ -0.62
MTRR-222	ENST00000512311	MROH2B	Q7Z745	1585 aa		11.16	□□□□□ -0.62
MTRR-222	ENST00000512311	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.12	□□□□□ -0.63
MTRR-222	ENST00000512311	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
MTRR-222	ENST00000512311	SMARCA4	P51532	1647 aa		11.04	□□□□□ -0.64
MTRR-222	ENST00000512311	WIZ	O95785	1651 aa		11.02	□□□□□ -0.64
MTRR-222	ENST00000512311	PPP4R3CP	Q6ZMV5	832 aa		11.02	□□□□□ -0.65
MTRR-222	ENST00000512311	DMRT2	Q9Y5R5	561 aa		10.98	□□□□□ -0.65
MTRR-222	ENST00000512311	SCAF1	Q9H7N4	1312 aa	Known RBP	10.97	□□□□□ -0.65
MTRR-222	ENST00000512311	PEG3	Q9GZU2	1588 aa		10.94	□□□□□ -0.66
MTRR-222	ENST00000512311	TOP2A	P11388	1531 aa	Known RBP	10.94	□□□□□ -0.66
MTRR-222	ENST00000512311	ATAD2B	Q9ULI0	1458 aa		10.87	□□□□□ -0.67
MTRR-222	ENST00000512311	CCDC88B	A6NC98	1476 aa		10.87	□□□□□ -0.67
MTRR-222	ENST00000512311	SMARCA2	P51531	1590 aa		10.85	□□□□□ -0.67
MTRR-222	ENST00000512311	EIF4G1	Q04637	1599 aa	Known RBP	10.8	□□□□□ -0.68
MTRR-222	ENST00000512311	NCAPD3	P42695	1498 aa		10.8	□□□□□ -0.68
MTRR-222	ENST00000512311	TRIM41	Q8WV44	630 aa		10.78	□□□□□ -0.68
MTRR-222	ENST00000512311	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.78	□□□□□ -0.68
MTRR-222	ENST00000512311	HMGXB3	Q12766	1538 aa		10.74	□□□□□ -0.69
MTRR-222	ENST00000512311	CNKSR2	Q8WXI2	1034 aa		10.73	□□□□□ -0.69
MTRR-222	ENST00000512311	HOXD11	P31277	338 aa	Predicted RBP	10.68	□□□□□ -0.7
MTRR-222	ENST00000512311	LOC105371045	A0A1W2PR82	267 aa		10.64	□□□□□ -0.71
MTRR-222	ENST00000512311	RNF216	Q9NWF9	866 aa	Predicted RBP	10.6	□□□□□ -0.71
MTRR-222	ENST00000512311	ABCC8	Q09428	1581 aa		10.6	□□□□□ -0.71
MTRR-222	ENST00000512311	CC2D2A	Q9P2K1	1620 aa		10.59	□□□□□ -0.71
MTRR-222	ENST00000512311	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.58	□□□□□ -0.72
MTRR-222	ENST00000512311	CFTR	P13569	1480 aa		10.57	□□□□□ -0.72
MTRR-222	ENST00000512311	NCBP3	Q53F19	620 aa	Known RBP	10.55	□□□□□ -0.72
MTRR-222	ENST00000512311	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.54	□□□□□ -0.72
MTRR-222	ENST00000512311	NPM3	O75607	178 aa	Known RBP	10.53	□□□□□ -0.72
MTRR-222	ENST00000512311	KCNA4	P22459	653 aa		10.53	□□□□□ -0.72
MTRR-222	ENST00000512311	EEA1	Q15075	1411 aa		10.52	□□□□□ -0.73
MTRR-222	ENST00000512311	CADPS	Q9ULU8	1353 aa		10.52	□□□□□ -0.73
MTRR-222	ENST00000512311	SYNJ1	O43426	1573 aa		10.49	□□□□□ -0.73
MTRR-222	ENST00000512311	SOGA1	O94964	1423 aa		10.49	□□□□□ -0.73
MTRR-222	ENST00000512311	CSRNP3	Q8WYN3	585 aa		10.47	□□□□□ -0.73
MTRR-222	ENST00000512311	TOP2B	Q02880	1626 aa		10.47	□□□□□ -0.73
MTRR-222	ENST00000512311	BIVM-ERCC5	R4GMW8	1640 aa		10.44	□□□□□ -0.74
MTRR-222	ENST00000512311	RUSC2	Q8N2Y8	1516 aa		10.43	□□□□□ -0.74
MTRR-222	ENST00000512311	CUX1	P39880	1505 aa		10.42	□□□□□ -0.74
MTRR-222	ENST00000512311	DCAF8L1	A6NGE4	600 aa		10.41	□□□□□ -0.74
MTRR-222	ENST00000512311	PRDM2	Q13029	1718 aa		10.41	□□□□□ -0.74
MTRR-222	ENST00000512311	TNIK	Q9UKE5	1360 aa		10.39	□□□□□ -0.75
MTRR-222	ENST00000512311	DNAJC5B	Q9UF47	199 aa		10.36	□□□□□ -0.75
MTRR-222	ENST00000512311	FANCD2	Q9BXW9	1451 aa		10.36	□□□□□ -0.75
MTRR-222	ENST00000512311	LAMC3	Q9Y6N6	1575 aa		10.35	□□□□□ -0.75
MTRR-222	ENST00000512311	GOLGA3	Q08378	1498 aa		10.34	□□□□□ -0.75
MTRR-222	ENST00000512311	CEP164	Q9UPV0	1460 aa		10.34	□□□□□ -0.75
MTRR-222	ENST00000512311	EHMT2	Q96KQ7	1210 aa		10.33	□□□□□ -0.76
MTRR-222	ENST00000512311	KIF21B	O75037	1637 aa		10.33	□□□□□ -0.76
MTRR-222	ENST00000512311	NES	P48681	1621 aa		10.33	□□□□□ -0.76
MTRR-222	ENST00000512311	KIF27	Q86VH2	1401 aa		10.31	□□□□□ -0.76
MTRR-222	ENST00000512311	PDS5B	Q9NTI5	1447 aa		10.3	□□□□□ -0.76
MTRR-222	ENST00000512311	PRX	Q9BXM0	1461 aa		10.3	□□□□□ -0.76
MTRR-222	ENST00000512311	UBTF	P17480	764 aa	Known RBP	10.29	□□□□□ -0.76
MTRR-222	ENST00000512311	CEP162	Q5TB80	1403 aa		10.28	□□□□□ -0.76
MTRR-222	ENST00000512311	DNMBP	Q6XZF7	1577 aa		10.27	□□□□□ -0.76
MTRR-222	ENST00000512311	FGD5	Q6ZNL6	1462 aa		10.27	□□□□□ -0.77
MTRR-222	ENST00000512311	TRIM26	Q12899	539 aa	Predicted RBP	10.26	□□□□□ -0.77
MTRR-222	ENST00000512311	TOPBP1	Q92547	1522 aa		10.26	□□□□□ -0.77
MTRR-222	ENST00000512311	IGF1R	P08069	1367 aa		10.26	□□□□□ -0.77
MTRR-222	ENST00000512311	RAPGEF2	Q9Y4G8	1499 aa		10.25	□□□□□ -0.77
MTRR-222	ENST00000512311	ERICH3	Q5RHP9	1530 aa		10.25	□□□□□ -0.77
MTRR-222	ENST00000512311	PCGF6	Q9BYE7	350 aa		10.24	□□□□□ -0.77
MTRR-222	ENST00000512311	CUX2	O14529	1486 aa		10.23	□□□□□ -0.77
MTRR-222	ENST00000512311	URB2	Q14146	1524 aa	Known RBP	10.23	□□□□□ -0.77
MTRR-222	ENST00000512311	RNF39	Q9H2S5	420 aa		10.22	□□□□□ -0.77
MTRR-222	ENST00000512311	POLA1	P09884	1462 aa	Predicted RBP	10.22	□□□□□ -0.77
MTRR-222	ENST00000512311	ABCA10	Q8WWZ4	1543 aa		10.22	□□□□□ -0.77
MTRR-222	ENST00000512311	RAD54L2	Q9Y4B4	1467 aa		10.18	□□□□□ -0.78
MTRR-222	ENST00000512311	CLIP1	P30622	1438 aa		10.18	□□□□□ -0.78
MTRR-222	ENST00000512311	CARMIL1	Q5VZK9	1371 aa		10.17	□□□□□ -0.78
MTRR-222	ENST00000512311	KIF21A	Q7Z4S6	1674 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms