RNA–Protein interactions for RNA: ENST00000510736.1

LINC00499-203, long intergenic non-protein coding RNA 499, humanhuman

TSL 5 BASIC

Gene LINC00499, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00499-203ENST00000510736 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
LINC00499-203ENST00000510736 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
LINC00499-203ENST00000510736 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
LINC00499-203ENST00000510736 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
LINC00499-203ENST00000510736 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
LINC00499-203ENST00000510736 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
LINC00499-203ENST00000510736 FOXD1Q16676 465 aa18.69■□□□□ 0.58
LINC00499-203ENST00000510736 ADRA2BP18089 450 aa18.23■□□□□ 0.51
LINC00499-203ENST00000510736 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
LINC00499-203ENST00000510736 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
LINC00499-203ENST00000510736 PIAS4Q8N2W9 510 aaPredicted RBP17.69■□□□□ 0.42
LINC00499-203ENST00000510736 ABCC9O60706 1549 aa17.28■□□□□ 0.36
LINC00499-203ENST00000510736 MSH5O43196 834 aa17.1■□□□□ 0.33
LINC00499-203ENST00000510736 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
LINC00499-203ENST00000510736 KCNA4P22459 653 aa17■□□□□ 0.31
LINC00499-203ENST00000510736 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
LINC00499-203ENST00000510736 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
LINC00499-203ENST00000510736 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
LINC00499-203ENST00000510736 NACADO15069 1562 aa16.58■□□□□ 0.24
LINC00499-203ENST00000510736 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
LINC00499-203ENST00000510736 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
LINC00499-203ENST00000510736 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
LINC00499-203ENST00000510736 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
LINC00499-203ENST00000510736 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
LINC00499-203ENST00000510736 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
LINC00499-203ENST00000510736 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
LINC00499-203ENST00000510736 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
LINC00499-203ENST00000510736 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
LINC00499-203ENST00000510736 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
LINC00499-203ENST00000510736 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
LINC00499-203ENST00000510736 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
LINC00499-203ENST00000510736 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
LINC00499-203ENST00000510736 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC00499-203ENST00000510736 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00499-203ENST00000510736 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
LINC00499-203ENST00000510736 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
LINC00499-203ENST00000510736 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
LINC00499-203ENST00000510736 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
LINC00499-203ENST00000510736 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
LINC00499-203ENST00000510736 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
LINC00499-203ENST00000510736 ZBTB22O15209 634 aa15.65■□□□□ 0.1
LINC00499-203ENST00000510736 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
LINC00499-203ENST00000510736 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
LINC00499-203ENST00000510736 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
LINC00499-203ENST00000510736 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
LINC00499-203ENST00000510736 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
LINC00499-203ENST00000510736 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
LINC00499-203ENST00000510736 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
LINC00499-203ENST00000510736 PEG3Q9GZU2 1588 aa15.26■□□□□ 0.03
LINC00499-203ENST00000510736 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
LINC00499-203ENST00000510736 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
LINC00499-203ENST00000510736 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
LINC00499-203ENST00000510736 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
LINC00499-203ENST00000510736 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
LINC00499-203ENST00000510736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC00499-203ENST00000510736 WIZO95785 1651 aa15.16■□□□□ 0.02
LINC00499-203ENST00000510736 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
LINC00499-203ENST00000510736 POTEDQ86YR6 584 aa15.03■□□□□ -0
LINC00499-203ENST00000510736 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
LINC00499-203ENST00000510736 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
LINC00499-203ENST00000510736 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
LINC00499-203ENST00000510736 NESP48681 1621 aa14.97□□□□□ -0.01
LINC00499-203ENST00000510736 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
LINC00499-203ENST00000510736 KIF21AQ7Z4S6 1674 aa14.93□□□□□ -0.02
LINC00499-203ENST00000510736 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
LINC00499-203ENST00000510736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
LINC00499-203ENST00000510736 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
LINC00499-203ENST00000510736 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
LINC00499-203ENST00000510736 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
LINC00499-203ENST00000510736 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
LINC00499-203ENST00000510736 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
LINC00499-203ENST00000510736 CUX2O14529 1486 aa14.77□□□□□ -0.04
LINC00499-203ENST00000510736 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
LINC00499-203ENST00000510736 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
LINC00499-203ENST00000510736 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
LINC00499-203ENST00000510736 CFTRP13569 1480 aa14.7□□□□□ -0.06
LINC00499-203ENST00000510736 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
LINC00499-203ENST00000510736 RNF39Q9H2S5 420 aa14.68□□□□□ -0.06
LINC00499-203ENST00000510736 APLP2Q06481 763 aa14.65□□□□□ -0.06
LINC00499-203ENST00000510736 WDR62O43379 1518 aa14.65□□□□□ -0.06
LINC00499-203ENST00000510736 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
LINC00499-203ENST00000510736 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
LINC00499-203ENST00000510736 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
LINC00499-203ENST00000510736 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
LINC00499-203ENST00000510736 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
LINC00499-203ENST00000510736 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
LINC00499-203ENST00000510736 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
LINC00499-203ENST00000510736 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
LINC00499-203ENST00000510736 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
LINC00499-203ENST00000510736 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
LINC00499-203ENST00000510736 CAPN15O75808 1086 aa14.4□□□□□ -0.1
LINC00499-203ENST00000510736 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
LINC00499-203ENST00000510736 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
LINC00499-203ENST00000510736 TARBP1Q13395 1621 aaKnown RBP14.36□□□□□ -0.11
LINC00499-203ENST00000510736 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
LINC00499-203ENST00000510736 CUX1P39880 1505 aa14.32□□□□□ -0.12
LINC00499-203ENST00000510736 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
LINC00499-203ENST00000510736 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
LINC00499-203ENST00000510736 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
LINC00499-203ENST00000510736 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms