RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
RETREG1-205ENST00000509977 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
RETREG1-205ENST00000509977 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
RETREG1-205ENST00000509977 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
RETREG1-205ENST00000509977 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
RETREG1-205ENST00000509977 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
RETREG1-205ENST00000509977 FOXD1Q16676 465 aa17.2■□□□□ 0.34
RETREG1-205ENST00000509977 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
RETREG1-205ENST00000509977 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
RETREG1-205ENST00000509977 ADRA2BP18089 450 aa16.31■□□□□ 0.2
RETREG1-205ENST00000509977 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
RETREG1-205ENST00000509977 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
RETREG1-205ENST00000509977 MSH5O43196 834 aa15.97■□□□□ 0.15
RETREG1-205ENST00000509977 ABCC9O60706 1549 aa15.79■□□□□ 0.12
RETREG1-205ENST00000509977 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
RETREG1-205ENST00000509977 NACADO15069 1562 aa15.15■□□□□ 0.02
RETREG1-205ENST00000509977 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
RETREG1-205ENST00000509977 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
RETREG1-205ENST00000509977 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
RETREG1-205ENST00000509977 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
RETREG1-205ENST00000509977 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
RETREG1-205ENST00000509977 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
RETREG1-205ENST00000509977 PPP4R3CPQ6ZMV5 832 aa14.87□□□□□ -0.03
RETREG1-205ENST00000509977 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
RETREG1-205ENST00000509977 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
RETREG1-205ENST00000509977 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
RETREG1-205ENST00000509977 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
RETREG1-205ENST00000509977 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
RETREG1-205ENST00000509977 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
RETREG1-205ENST00000509977 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
RETREG1-205ENST00000509977 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
RETREG1-205ENST00000509977 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
RETREG1-205ENST00000509977 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
RETREG1-205ENST00000509977 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
RETREG1-205ENST00000509977 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
RETREG1-205ENST00000509977 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
RETREG1-205ENST00000509977 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
RETREG1-205ENST00000509977 KCNA4P22459 653 aa14.21□□□□□ -0.13
RETREG1-205ENST00000509977 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
RETREG1-205ENST00000509977 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
RETREG1-205ENST00000509977 NCAPD3P42695 1498 aa13.98□□□□□ -0.17
RETREG1-205ENST00000509977 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
RETREG1-205ENST00000509977 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
RETREG1-205ENST00000509977 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
RETREG1-205ENST00000509977 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
RETREG1-205ENST00000509977 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
RETREG1-205ENST00000509977 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
RETREG1-205ENST00000509977 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
RETREG1-205ENST00000509977 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
RETREG1-205ENST00000509977 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
RETREG1-205ENST00000509977 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
RETREG1-205ENST00000509977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
RETREG1-205ENST00000509977 NESP48681 1621 aa13.64□□□□□ -0.23
RETREG1-205ENST00000509977 WIZO95785 1651 aa13.64□□□□□ -0.23
RETREG1-205ENST00000509977 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
RETREG1-205ENST00000509977 CUX2O14529 1486 aa13.63□□□□□ -0.23
RETREG1-205ENST00000509977 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
RETREG1-205ENST00000509977 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
RETREG1-205ENST00000509977 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
RETREG1-205ENST00000509977 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
RETREG1-205ENST00000509977 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
RETREG1-205ENST00000509977 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
RETREG1-205ENST00000509977 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
RETREG1-205ENST00000509977 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
RETREG1-205ENST00000509977 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
RETREG1-205ENST00000509977 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
RETREG1-205ENST00000509977 CFTRP13569 1480 aa13.42□□□□□ -0.26
RETREG1-205ENST00000509977 WDR62O43379 1518 aa13.4□□□□□ -0.26
RETREG1-205ENST00000509977 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
RETREG1-205ENST00000509977 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
RETREG1-205ENST00000509977 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
RETREG1-205ENST00000509977 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
RETREG1-205ENST00000509977 FANCD2Q9BXW9 1451 aa13.35□□□□□ -0.27
RETREG1-205ENST00000509977 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
RETREG1-205ENST00000509977 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
RETREG1-205ENST00000509977 POTEHQ6S545 545 aa13.28□□□□□ -0.28
RETREG1-205ENST00000509977 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
RETREG1-205ENST00000509977 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
RETREG1-205ENST00000509977 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
RETREG1-205ENST00000509977 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
RETREG1-205ENST00000509977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
RETREG1-205ENST00000509977 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
RETREG1-205ENST00000509977 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
RETREG1-205ENST00000509977 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
RETREG1-205ENST00000509977 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
RETREG1-205ENST00000509977 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
RETREG1-205ENST00000509977 ZBTB22O15209 634 aa13.07□□□□□ -0.32
RETREG1-205ENST00000509977 CAPN15O75808 1086 aa13.07□□□□□ -0.32
RETREG1-205ENST00000509977 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
RETREG1-205ENST00000509977 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
RETREG1-205ENST00000509977 APLP2Q06481 763 aa13.05□□□□□ -0.32
RETREG1-205ENST00000509977 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
RETREG1-205ENST00000509977 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
RETREG1-205ENST00000509977 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
RETREG1-205ENST00000509977 CUX1P39880 1505 aa12.98□□□□□ -0.33
RETREG1-205ENST00000509977 WDR97A6NE52 1622 aa12.96□□□□□ -0.33
RETREG1-205ENST00000509977 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
RETREG1-205ENST00000509977 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
RETREG1-205ENST00000509977 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
RETREG1-205ENST00000509977 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms