RNA–Protein interactions for RNA: ENST00000509518.1

CHRNA9-203, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 465 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-203ENST00000509518 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
CHRNA9-203ENST00000509518 HRCP23327 699 aa15.96■□□□□ 0.15
CHRNA9-203ENST00000509518 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
CHRNA9-203ENST00000509518 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
CHRNA9-203ENST00000509518 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
CHRNA9-203ENST00000509518 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
CHRNA9-203ENST00000509518 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
CHRNA9-203ENST00000509518 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
CHRNA9-203ENST00000509518 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
CHRNA9-203ENST00000509518 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
CHRNA9-203ENST00000509518 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
CHRNA9-203ENST00000509518 ZEB1P37275 1124 aaPredicted RBP15.37■□□□□ 0.05
CHRNA9-203ENST00000509518 MYT1Q01538 1121 aa15.26■□□□□ 0.03
CHRNA9-203ENST00000509518 TRIM26Q12899 539 aaPredicted RBP15.25■□□□□ 0.03
CHRNA9-203ENST00000509518 PPARGC1BQ86YN6 1023 aaKnown RBP15.16■□□□□ 0.02
CHRNA9-203ENST00000509518 ABCC9O60706 1549 aa15.13■□□□□ 0.01
CHRNA9-203ENST00000509518 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
CHRNA9-203ENST00000509518 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
CHRNA9-203ENST00000509518 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
CHRNA9-203ENST00000509518 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
CHRNA9-203ENST00000509518 ACIN1Q9UKV3 1341 aaKnown RBP14.69□□□□□ -0.06
CHRNA9-203ENST00000509518 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
CHRNA9-203ENST00000509518 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
CHRNA9-203ENST00000509518 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
CHRNA9-203ENST00000509518 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
CHRNA9-203ENST00000509518 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
CHRNA9-203ENST00000509518 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
CHRNA9-203ENST00000509518 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
CHRNA9-203ENST00000509518 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
CHRNA9-203ENST00000509518 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
CHRNA9-203ENST00000509518 CLSPNQ9HAW4 1339 aa14.44□□□□□ -0.1
CHRNA9-203ENST00000509518 NACADO15069 1562 aa14.44□□□□□ -0.1
CHRNA9-203ENST00000509518 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
CHRNA9-203ENST00000509518 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
CHRNA9-203ENST00000509518 EEA1Q15075 1411 aa14.39□□□□□ -0.11
CHRNA9-203ENST00000509518 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
CHRNA9-203ENST00000509518 WIZO95785 1651 aa14.3□□□□□ -0.12
CHRNA9-203ENST00000509518 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
CHRNA9-203ENST00000509518 FAM9AQ8IZU1 332 aaPredicted RBP14.29□□□□□ -0.12
CHRNA9-203ENST00000509518 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
CHRNA9-203ENST00000509518 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
CHRNA9-203ENST00000509518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
CHRNA9-203ENST00000509518 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
CHRNA9-203ENST00000509518 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
CHRNA9-203ENST00000509518 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
CHRNA9-203ENST00000509518 KIF21BO75037 1637 aa14.17□□□□□ -0.14
CHRNA9-203ENST00000509518 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
CHRNA9-203ENST00000509518 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
CHRNA9-203ENST00000509518 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
CHRNA9-203ENST00000509518 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
CHRNA9-203ENST00000509518 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
CHRNA9-203ENST00000509518 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
CHRNA9-203ENST00000509518 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
CHRNA9-203ENST00000509518 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
CHRNA9-203ENST00000509518 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
CHRNA9-203ENST00000509518 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
CHRNA9-203ENST00000509518 MIER1Q8N108 512 aa13.94□□□□□ -0.18
CHRNA9-203ENST00000509518 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
CHRNA9-203ENST00000509518 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
CHRNA9-203ENST00000509518 SOGA1O94964 1423 aa13.91□□□□□ -0.18
CHRNA9-203ENST00000509518 CLIP1P30622 1438 aa13.9□□□□□ -0.18
CHRNA9-203ENST00000509518 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
CHRNA9-203ENST00000509518 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
CHRNA9-203ENST00000509518 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
CHRNA9-203ENST00000509518 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
CHRNA9-203ENST00000509518 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
CHRNA9-203ENST00000509518 CUX2O14529 1486 aa13.83□□□□□ -0.2
CHRNA9-203ENST00000509518 APLP2Q06481 763 aa13.83□□□□□ -0.2
CHRNA9-203ENST00000509518 SUPT16HQ9Y5B9 1047 aaKnown RBP13.83□□□□□ -0.2
CHRNA9-203ENST00000509518 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
CHRNA9-203ENST00000509518 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
CHRNA9-203ENST00000509518 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
CHRNA9-203ENST00000509518 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
CHRNA9-203ENST00000509518 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
CHRNA9-203ENST00000509518 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
CHRNA9-203ENST00000509518 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
CHRNA9-203ENST00000509518 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
CHRNA9-203ENST00000509518 BCL11AQ9H165 835 aa13.66□□□□□ -0.22
CHRNA9-203ENST00000509518 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
CHRNA9-203ENST00000509518 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
CHRNA9-203ENST00000509518 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
CHRNA9-203ENST00000509518 NEFLP07196 543 aa13.64□□□□□ -0.23
CHRNA9-203ENST00000509518 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
CHRNA9-203ENST00000509518 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
CHRNA9-203ENST00000509518 CFAP43Q8NDM7 1665 aa13.56□□□□□ -0.24
CHRNA9-203ENST00000509518 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
CHRNA9-203ENST00000509518 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
CHRNA9-203ENST00000509518 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
CHRNA9-203ENST00000509518 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
CHRNA9-203ENST00000509518 MAPKBP1O60336 1514 aa13.53□□□□□ -0.24
CHRNA9-203ENST00000509518 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
CHRNA9-203ENST00000509518 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
CHRNA9-203ENST00000509518 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
CHRNA9-203ENST00000509518 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
CHRNA9-203ENST00000509518 ERICH6BQ5W0A0 696 aa13.45□□□□□ -0.26
CHRNA9-203ENST00000509518 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
CHRNA9-203ENST00000509518 FKBP8Q14318 412 aa13.44□□□□□ -0.26
CHRNA9-203ENST00000509518 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
CHRNA9-203ENST00000509518 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
CHRNA9-203ENST00000509518 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms