RNA–Protein interactions for RNA: ENST00000509157.5

FRMD1-208, Transcript of FERM domain containing 1, humanhuman

TSL 5

Gene FRMD1, Length 2,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-208ENST00000509157 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
FRMD1-208ENST00000509157 CCDC180Q9P1Z9 1646 aa28.48■■■□□ 2.15
FRMD1-208ENST00000509157 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
FRMD1-208ENST00000509157 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
FRMD1-208ENST00000509157 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
FRMD1-208ENST00000509157 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
FRMD1-208ENST00000509157 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
FRMD1-208ENST00000509157 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
FRMD1-208ENST00000509157 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
FRMD1-208ENST00000509157 ABCC9O60706 1549 aa26.76■■□□□ 1.87
FRMD1-208ENST00000509157 SCRIBQ14160 1630 aa26.55■■□□□ 1.84
FRMD1-208ENST00000509157 HRCP23327 699 aa26.55■■□□□ 1.84
FRMD1-208ENST00000509157 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
FRMD1-208ENST00000509157 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
FRMD1-208ENST00000509157 PCGF6Q9BYE7 350 aa26.37■■□□□ 1.81
FRMD1-208ENST00000509157 NACADO15069 1562 aa26.3■■□□□ 1.8
FRMD1-208ENST00000509157 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
FRMD1-208ENST00000509157 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
FRMD1-208ENST00000509157 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
FRMD1-208ENST00000509157 TRIM41Q8WV44 630 aa26■■□□□ 1.75
FRMD1-208ENST00000509157 TRIM26Q12899 539 aaPredicted RBP25.96■■□□□ 1.75
FRMD1-208ENST00000509157 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
FRMD1-208ENST00000509157 WIZO95785 1651 aa25.84■■□□□ 1.73
FRMD1-208ENST00000509157 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
FRMD1-208ENST00000509157 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
FRMD1-208ENST00000509157 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
FRMD1-208ENST00000509157 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
FRMD1-208ENST00000509157 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
FRMD1-208ENST00000509157 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
FRMD1-208ENST00000509157 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
FRMD1-208ENST00000509157 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
FRMD1-208ENST00000509157 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
FRMD1-208ENST00000509157 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
FRMD1-208ENST00000509157 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
FRMD1-208ENST00000509157 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
FRMD1-208ENST00000509157 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
FRMD1-208ENST00000509157 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
FRMD1-208ENST00000509157 SOGA1O94964 1423 aa25.05■■□□□ 1.6
FRMD1-208ENST00000509157 EEA1Q15075 1411 aa25.03■■□□□ 1.6
FRMD1-208ENST00000509157 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
FRMD1-208ENST00000509157 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
FRMD1-208ENST00000509157 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
FRMD1-208ENST00000509157 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
FRMD1-208ENST00000509157 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
FRMD1-208ENST00000509157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
FRMD1-208ENST00000509157 GOLGA3Q08378 1498 aa24.81■■□□□ 1.56
FRMD1-208ENST00000509157 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
FRMD1-208ENST00000509157 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
FRMD1-208ENST00000509157 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
FRMD1-208ENST00000509157 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
FRMD1-208ENST00000509157 KIF21BO75037 1637 aa24.69■■□□□ 1.54
FRMD1-208ENST00000509157 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
FRMD1-208ENST00000509157 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
FRMD1-208ENST00000509157 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
FRMD1-208ENST00000509157 CLIP1P30622 1438 aa24.49■■□□□ 1.51
FRMD1-208ENST00000509157 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
FRMD1-208ENST00000509157 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
FRMD1-208ENST00000509157 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.5
FRMD1-208ENST00000509157 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
FRMD1-208ENST00000509157 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
FRMD1-208ENST00000509157 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
FRMD1-208ENST00000509157 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
FRMD1-208ENST00000509157 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
FRMD1-208ENST00000509157 PRXQ9BXM0 1461 aa24.29■■□□□ 1.48
FRMD1-208ENST00000509157 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
FRMD1-208ENST00000509157 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
FRMD1-208ENST00000509157 CUX1P39880 1505 aa24.21■■□□□ 1.47
FRMD1-208ENST00000509157 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
FRMD1-208ENST00000509157 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
FRMD1-208ENST00000509157 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
FRMD1-208ENST00000509157 APLP2Q06481 763 aa24.16■■□□□ 1.46
FRMD1-208ENST00000509157 CFTRP13569 1480 aa24.16■■□□□ 1.46
FRMD1-208ENST00000509157 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
FRMD1-208ENST00000509157 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
FRMD1-208ENST00000509157 RANGAP1P46060 587 aaPredicted RBP24.07■■□□□ 1.44
FRMD1-208ENST00000509157 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
FRMD1-208ENST00000509157 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
FRMD1-208ENST00000509157 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
FRMD1-208ENST00000509157 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
FRMD1-208ENST00000509157 CLSPNQ9HAW4 1339 aa23.94■■□□□ 1.42
FRMD1-208ENST00000509157 RRBP1Q9P2E9 1410 aaKnown RBP23.93■■□□□ 1.42
FRMD1-208ENST00000509157 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
FRMD1-208ENST00000509157 DHX57Q6P158 1386 aaKnown RBP23.89■■□□□ 1.41
FRMD1-208ENST00000509157 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
FRMD1-208ENST00000509157 IGF1RP08069 1367 aa23.86■■□□□ 1.41
FRMD1-208ENST00000509157 CUX2O14529 1486 aa23.84■■□□□ 1.41
FRMD1-208ENST00000509157 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
FRMD1-208ENST00000509157 MIER1Q8N108 512 aa23.83■■□□□ 1.41
FRMD1-208ENST00000509157 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
FRMD1-208ENST00000509157 MAP3K1Q13233 1512 aa23.75■■□□□ 1.39
FRMD1-208ENST00000509157 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
FRMD1-208ENST00000509157 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
FRMD1-208ENST00000509157 TIAM1Q13009 1591 aa23.67■■□□□ 1.38
FRMD1-208ENST00000509157 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
FRMD1-208ENST00000509157 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
FRMD1-208ENST00000509157 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.36
FRMD1-208ENST00000509157 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
FRMD1-208ENST00000509157 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
FRMD1-208ENST00000509157 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
FRMD1-208ENST00000509157 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms