RNA–Protein interactions for RNA: ENST00000508509.5

MCTP1-209, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene MCTP1, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-209ENST00000508509 NISCHQ9Y2I1 1504 aa21.41■■□□□ 1.02
MCTP1-209ENST00000508509 HRCP23327 699 aa18.76■□□□□ 0.59
MCTP1-209ENST00000508509 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
MCTP1-209ENST00000508509 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
MCTP1-209ENST00000508509 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
MCTP1-209ENST00000508509 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
MCTP1-209ENST00000508509 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
MCTP1-209ENST00000508509 PCGF6Q9BYE7 350 aa18.27■□□□□ 0.52
MCTP1-209ENST00000508509 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
MCTP1-209ENST00000508509 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
MCTP1-209ENST00000508509 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
MCTP1-209ENST00000508509 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
MCTP1-209ENST00000508509 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
MCTP1-209ENST00000508509 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
MCTP1-209ENST00000508509 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
MCTP1-209ENST00000508509 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.42
MCTP1-209ENST00000508509 ABCC9O60706 1549 aa17.36■□□□□ 0.37
MCTP1-209ENST00000508509 DCAF8L2P0C7V8 631 aa17.35■□□□□ 0.37
MCTP1-209ENST00000508509 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
MCTP1-209ENST00000508509 MYT1Q01538 1121 aa17.23■□□□□ 0.35
MCTP1-209ENST00000508509 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
MCTP1-209ENST00000508509 RSF1Q96T23 1441 aaPredicted RBP17.17■□□□□ 0.34
MCTP1-209ENST00000508509 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
MCTP1-209ENST00000508509 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
MCTP1-209ENST00000508509 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
MCTP1-209ENST00000508509 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
MCTP1-209ENST00000508509 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
MCTP1-209ENST00000508509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
MCTP1-209ENST00000508509 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.3
MCTP1-209ENST00000508509 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
MCTP1-209ENST00000508509 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
MCTP1-209ENST00000508509 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
MCTP1-209ENST00000508509 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
MCTP1-209ENST00000508509 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
MCTP1-209ENST00000508509 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
MCTP1-209ENST00000508509 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
MCTP1-209ENST00000508509 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
MCTP1-209ENST00000508509 WIZO95785 1651 aa16.65■□□□□ 0.26
MCTP1-209ENST00000508509 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
MCTP1-209ENST00000508509 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
MCTP1-209ENST00000508509 MIER1Q8N108 512 aa16.55■□□□□ 0.24
MCTP1-209ENST00000508509 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
MCTP1-209ENST00000508509 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.24
MCTP1-209ENST00000508509 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
MCTP1-209ENST00000508509 NACADO15069 1562 aa16.47■□□□□ 0.23
MCTP1-209ENST00000508509 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
MCTP1-209ENST00000508509 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
MCTP1-209ENST00000508509 SOGA1O94964 1423 aa16.41■□□□□ 0.22
MCTP1-209ENST00000508509 EEA1Q15075 1411 aa16.38■□□□□ 0.21
MCTP1-209ENST00000508509 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
MCTP1-209ENST00000508509 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
MCTP1-209ENST00000508509 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
MCTP1-209ENST00000508509 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
MCTP1-209ENST00000508509 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
MCTP1-209ENST00000508509 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
MCTP1-209ENST00000508509 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
MCTP1-209ENST00000508509 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
MCTP1-209ENST00000508509 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
MCTP1-209ENST00000508509 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
MCTP1-209ENST00000508509 KIF21BO75037 1637 aa16.21■□□□□ 0.19
MCTP1-209ENST00000508509 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
MCTP1-209ENST00000508509 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
MCTP1-209ENST00000508509 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
MCTP1-209ENST00000508509 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
MCTP1-209ENST00000508509 CLIP1P30622 1438 aa16.15■□□□□ 0.18
MCTP1-209ENST00000508509 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
MCTP1-209ENST00000508509 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
MCTP1-209ENST00000508509 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.17
MCTP1-209ENST00000508509 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
MCTP1-209ENST00000508509 CUX2O14529 1486 aa15.98■□□□□ 0.15
MCTP1-209ENST00000508509 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
MCTP1-209ENST00000508509 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
MCTP1-209ENST00000508509 RRBP1Q9P2E9 1410 aaKnown RBP15.92■□□□□ 0.14
MCTP1-209ENST00000508509 APLP2Q06481 763 aa15.91■□□□□ 0.14
MCTP1-209ENST00000508509 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
MCTP1-209ENST00000508509 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
MCTP1-209ENST00000508509 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
MCTP1-209ENST00000508509 MAPKBP1O60336 1514 aa15.83■□□□□ 0.12
MCTP1-209ENST00000508509 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
MCTP1-209ENST00000508509 RBM19Q9Y4C8 960 aaKnown RBP15.83■□□□□ 0.12
MCTP1-209ENST00000508509 BCANQ96GW7 911 aa15.82■□□□□ 0.12
MCTP1-209ENST00000508509 FKBP8Q14318 412 aa15.82■□□□□ 0.12
MCTP1-209ENST00000508509 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
MCTP1-209ENST00000508509 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
MCTP1-209ENST00000508509 PRXQ9BXM0 1461 aa15.78■□□□□ 0.12
MCTP1-209ENST00000508509 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
MCTP1-209ENST00000508509 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
MCTP1-209ENST00000508509 MSH5O43196 834 aa15.73■□□□□ 0.11
MCTP1-209ENST00000508509 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
MCTP1-209ENST00000508509 PPP1R15AO75807 674 aaPredicted RBP15.71■□□□□ 0.1
MCTP1-209ENST00000508509 RAB3GAP2Q9H2M9 1393 aa15.7■□□□□ 0.1
MCTP1-209ENST00000508509 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
MCTP1-209ENST00000508509 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
MCTP1-209ENST00000508509 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
MCTP1-209ENST00000508509 DDX10Q13206 875 aaKnown RBP15.65■□□□□ 0.1
MCTP1-209ENST00000508509 NEFLP07196 543 aa15.64■□□□□ 0.09
MCTP1-209ENST00000508509 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
MCTP1-209ENST00000508509 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
MCTP1-209ENST00000508509 ITGAEP38570 1179 aa15.62■□□□□ 0.09
MCTP1-209ENST00000508509 ATAD2BQ9ULI0 1458 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms