RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 AEBP2Q6ZN18 517 aaPredicted RBP34.8■■■■□ 3.16
CAST-221ENST00000508197 CHIC1Q5VXU3 224 aa33.64■■■□□ 2.98
CAST-221ENST00000508197 SENP3Q9H4L4 574 aaPredicted RBP29.67■■■□□ 2.34
CAST-221ENST00000508197 PHF23Q9BUL5 403 aaPredicted RBP29.51■■■□□ 2.31
CAST-221ENST00000508197 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
CAST-221ENST00000508197 FOXD1Q16676 465 aa27.53■■■□□ 2
CAST-221ENST00000508197 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
CAST-221ENST00000508197 ABCC9O60706 1549 aa26.24■■□□□ 1.79
CAST-221ENST00000508197 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
CAST-221ENST00000508197 ADRA2BP18089 450 aa26.14■■□□□ 1.78
CAST-221ENST00000508197 PIAS4Q8N2W9 510 aaPredicted RBP25.92■■□□□ 1.74
CAST-221ENST00000508197 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
CAST-221ENST00000508197 MSH5O43196 834 aa25.6■■□□□ 1.69
CAST-221ENST00000508197 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
CAST-221ENST00000508197 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
CAST-221ENST00000508197 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
CAST-221ENST00000508197 NACADO15069 1562 aa24.42■■□□□ 1.5
CAST-221ENST00000508197 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.49
CAST-221ENST00000508197 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
CAST-221ENST00000508197 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
CAST-221ENST00000508197 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
CAST-221ENST00000508197 POTEDQ86YR6 584 aa23.95■■□□□ 1.42
CAST-221ENST00000508197 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
CAST-221ENST00000508197 PPP4R3CPQ6ZMV5 832 aa23.88■■□□□ 1.41
CAST-221ENST00000508197 MAPK8IP2Q13387 824 aaPredicted RBP23.83■■□□□ 1.41
CAST-221ENST00000508197 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
CAST-221ENST00000508197 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
CAST-221ENST00000508197 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
CAST-221ENST00000508197 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
CAST-221ENST00000508197 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
CAST-221ENST00000508197 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
CAST-221ENST00000508197 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
CAST-221ENST00000508197 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
CAST-221ENST00000508197 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
CAST-221ENST00000508197 CNKSR2Q8WXI2 1034 aa23.32■■□□□ 1.32
CAST-221ENST00000508197 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
CAST-221ENST00000508197 RNF216Q9NWF9 866 aaPredicted RBP22.95■■□□□ 1.26
CAST-221ENST00000508197 HOXD11P31277 338 aaPredicted RBP22.94■■□□□ 1.26
CAST-221ENST00000508197 KCNA4P22459 653 aa22.87■■□□□ 1.25
CAST-221ENST00000508197 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
CAST-221ENST00000508197 CUX2O14529 1486 aa22.7■■□□□ 1.22
CAST-221ENST00000508197 DCAF8L1A6NGE4 600 aa22.65■■□□□ 1.22
CAST-221ENST00000508197 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
CAST-221ENST00000508197 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
CAST-221ENST00000508197 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
CAST-221ENST00000508197 NESP48681 1621 aa22.45■■□□□ 1.18
CAST-221ENST00000508197 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
CAST-221ENST00000508197 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
CAST-221ENST00000508197 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
CAST-221ENST00000508197 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
CAST-221ENST00000508197 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
CAST-221ENST00000508197 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
CAST-221ENST00000508197 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
CAST-221ENST00000508197 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
CAST-221ENST00000508197 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
CAST-221ENST00000508197 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
CAST-221ENST00000508197 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
CAST-221ENST00000508197 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
CAST-221ENST00000508197 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
CAST-221ENST00000508197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.13e-7■■■□□ 18.9
CAST-221ENST00000508197 RNF39Q9H2S5 420 aa21.86■■□□□ 1.09
CAST-221ENST00000508197 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
CAST-221ENST00000508197 WDR62O43379 1518 aa21.8■■□□□ 1.08
CAST-221ENST00000508197 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
CAST-221ENST00000508197 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
CAST-221ENST00000508197 WIZO95785 1651 aa21.68■■□□□ 1.06
CAST-221ENST00000508197 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
CAST-221ENST00000508197 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.06
CAST-221ENST00000508197 CACNB1Q02641 598 aaPredicted RBP21.62■■□□□ 1.05
CAST-221ENST00000508197 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
CAST-221ENST00000508197 SLC4A2P04920 1241 aa21.6■■□□□ 1.05
CAST-221ENST00000508197 CFTRP13569 1480 aa21.58■■□□□ 1.05
CAST-221ENST00000508197 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
CAST-221ENST00000508197 U3KPZ7 1027 aaPredicted RBP21.46■■□□□ 1.03
CAST-221ENST00000508197 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
CAST-221ENST00000508197 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
CAST-221ENST00000508197 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
CAST-221ENST00000508197 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
CAST-221ENST00000508197 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
CAST-221ENST00000508197 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
CAST-221ENST00000508197 ARHGEF11O15085 1522 aa21.29■■□□□ 1
CAST-221ENST00000508197 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
CAST-221ENST00000508197 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
CAST-221ENST00000508197 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
CAST-221ENST00000508197 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
CAST-221ENST00000508197 FOXD4L1Q9NU39 408 aa21.19■□□□□ 0.98
CAST-221ENST00000508197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
CAST-221ENST00000508197 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
CAST-221ENST00000508197 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.972e-6■■■■□ 24.3
CAST-221ENST00000508197 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
CAST-221ENST00000508197 MYCNP04198 464 aaPredicted RBP21.1■□□□□ 0.97
CAST-221ENST00000508197 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
CAST-221ENST00000508197 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
CAST-221ENST00000508197 PRDM2Q13029 1718 aa21.08■□□□□ 0.97
CAST-221ENST00000508197 FBLN2P98095 1184 aa21.07■□□□□ 0.96
CAST-221ENST00000508197 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
CAST-221ENST00000508197 APLP2Q06481 763 aa21.02■□□□□ 0.96
CAST-221ENST00000508197 SAMD1Q6SPF0 538 aaPredicted RBP21.02■□□□□ 0.96
CAST-221ENST00000508197 ZBTB22O15209 634 aa21.01■□□□□ 0.95
CAST-221ENST00000508197 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms