RNA–Protein interactions for RNA: ENST00000506913.1

FAM13A-209, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 3

Gene FAM13A, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-209ENST00000506913 AEBP2Q6ZN18 517 aaPredicted RBP36.38■■■■□ 3.41
FAM13A-209ENST00000506913 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
FAM13A-209ENST00000506913 SENP3Q9H4L4 574 aaPredicted RBP30.77■■■□□ 2.52
FAM13A-209ENST00000506913 PHF23Q9BUL5 403 aaPredicted RBP30.53■■■□□ 2.48
FAM13A-209ENST00000506913 FOXD1Q16676 465 aa28.79■■■□□ 2.2
FAM13A-209ENST00000506913 PLPPR3Q6T4P5 718 aa27.72■■■□□ 2.03
FAM13A-209ENST00000506913 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
FAM13A-209ENST00000506913 PPP6R1Q9UPN7 881 aa27.2■■□□□ 1.94
FAM13A-209ENST00000506913 ADRA2BP18089 450 aa27.08■■□□□ 1.93
FAM13A-209ENST00000506913 PIAS4Q8N2W9 510 aaPredicted RBP26.88■■□□□ 1.89
FAM13A-209ENST00000506913 MSH5O43196 834 aa26.68■■□□□ 1.86
FAM13A-209ENST00000506913 POTEDQ86YR6 584 aa25.77■■□□□ 1.72
FAM13A-209ENST00000506913 MAPK8IP2Q13387 824 aaPredicted RBP24.84■■□□□ 1.57
FAM13A-209ENST00000506913 SCAF1Q9H7N4 1312 aaKnown RBP24.53■■□□□ 1.52
FAM13A-209ENST00000506913 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
FAM13A-209ENST00000506913 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
FAM13A-209ENST00000506913 PPP4R3CPQ6ZMV5 832 aa24.4■■□□□ 1.5
FAM13A-209ENST00000506913 ABCC9O60706 1549 aa23.89■■□□□ 1.42
FAM13A-209ENST00000506913 CNKSR2Q8WXI2 1034 aa23.82■■□□□ 1.4
FAM13A-209ENST00000506913 HOXD11P31277 338 aaPredicted RBP23.71■■□□□ 1.39
FAM13A-209ENST00000506913 RNF216Q9NWF9 866 aaPredicted RBP23.56■■□□□ 1.36
FAM13A-209ENST00000506913 DCAF8L1A6NGE4 600 aa23.44■■□□□ 1.34
FAM13A-209ENST00000506913 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.33
FAM13A-209ENST00000506913 NPM3O75607 178 aaKnown RBP23.24■■□□□ 1.31
FAM13A-209ENST00000506913 KCNA4P22459 653 aa23.06■■□□□ 1.28
FAM13A-209ENST00000506913 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
FAM13A-209ENST00000506913 NACADO15069 1562 aa23.01■■□□□ 1.27
FAM13A-209ENST00000506913 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
FAM13A-209ENST00000506913 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
FAM13A-209ENST00000506913 RNF39Q9H2S5 420 aa22.89■■□□□ 1.25
FAM13A-209ENST00000506913 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
FAM13A-209ENST00000506913 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
FAM13A-209ENST00000506913 CACNB1Q02641 598 aaPredicted RBP22.78■■□□□ 1.24
FAM13A-209ENST00000506913 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
FAM13A-209ENST00000506913 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
FAM13A-209ENST00000506913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.2
FAM13A-209ENST00000506913 C1QBPQ07021 282 aaKnown RBP22.49■■□□□ 1.19
FAM13A-209ENST00000506913 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
FAM13A-209ENST00000506913 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
FAM13A-209ENST00000506913 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
FAM13A-209ENST00000506913 SLC4A2P04920 1241 aa22.19■■□□□ 1.14
FAM13A-209ENST00000506913 U3KPZ7 1027 aaPredicted RBP22.19■■□□□ 1.14
FAM13A-209ENST00000506913 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
FAM13A-209ENST00000506913 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
FAM13A-209ENST00000506913 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
FAM13A-209ENST00000506913 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
FAM13A-209ENST00000506913 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
FAM13A-209ENST00000506913 CAPN15O75808 1086 aa21.65■■□□□ 1.06
FAM13A-209ENST00000506913 DSG3P32926 999 aa21.54■■□□□ 1.04
FAM13A-209ENST00000506913 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
FAM13A-209ENST00000506913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
FAM13A-209ENST00000506913 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
FAM13A-209ENST00000506913 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.01
FAM13A-209ENST00000506913 MYCNP04198 464 aaPredicted RBP21.38■■□□□ 1.01
FAM13A-209ENST00000506913 SAMD1Q6SPF0 538 aaPredicted RBP21.37■■□□□ 1.01
FAM13A-209ENST00000506913 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
FAM13A-209ENST00000506913 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
FAM13A-209ENST00000506913 FOXD4L1Q9NU39 408 aa21.33■■□□□ 1.01
FAM13A-209ENST00000506913 APLP2Q06481 763 aa21.31■■□□□ 1
FAM13A-209ENST00000506913 ZBTB22O15209 634 aa21.28■■□□□ 1
FAM13A-209ENST00000506913 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
FAM13A-209ENST00000506913 ABCB7O75027 752 aa21.25■□□□□ 0.99
FAM13A-209ENST00000506913 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
FAM13A-209ENST00000506913 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
FAM13A-209ENST00000506913 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
FAM13A-209ENST00000506913 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
FAM13A-209ENST00000506913 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
FAM13A-209ENST00000506913 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
FAM13A-209ENST00000506913 ATF5Q9Y2D1 282 aaPredicted RBP21.07■□□□□ 0.96
FAM13A-209ENST00000506913 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
FAM13A-209ENST00000506913 WIZO95785 1651 aa20.98■□□□□ 0.95
FAM13A-209ENST00000506913 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
FAM13A-209ENST00000506913 POLA2Q14181 598 aa20.89■□□□□ 0.93
FAM13A-209ENST00000506913 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
FAM13A-209ENST00000506913 NESP48681 1621 aa20.69■□□□□ 0.9
FAM13A-209ENST00000506913 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
FAM13A-209ENST00000506913 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
FAM13A-209ENST00000506913 ATXN8OSP0DMR3 200 aa20.58■□□□□ 0.89
FAM13A-209ENST00000506913 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
FAM13A-209ENST00000506913 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
FAM13A-209ENST00000506913 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
FAM13A-209ENST00000506913 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
FAM13A-209ENST00000506913 CFTRP13569 1480 aa20.48■□□□□ 0.87
FAM13A-209ENST00000506913 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
FAM13A-209ENST00000506913 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
FAM13A-209ENST00000506913 CUX2O14529 1486 aa20.42■□□□□ 0.86
FAM13A-209ENST00000506913 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
FAM13A-209ENST00000506913 RBM42Q9BTD8 480 aaKnown RBP20.37■□□□□ 0.85
FAM13A-209ENST00000506913 FANCD2Q9BXW9 1451 aa20.35■□□□□ 0.85
FAM13A-209ENST00000506913 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
FAM13A-209ENST00000506913 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.85
FAM13A-209ENST00000506913 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
FAM13A-209ENST00000506913 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
FAM13A-209ENST00000506913 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
FAM13A-209ENST00000506913 WDR62O43379 1518 aa20.26■□□□□ 0.83
FAM13A-209ENST00000506913 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
FAM13A-209ENST00000506913 POTEHQ6S545 545 aa20.19■□□□□ 0.82
FAM13A-209ENST00000506913 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
FAM13A-209ENST00000506913 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
FAM13A-209ENST00000506913 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms