RNA–Protein interactions for RNA: ENST00000504517.5

SH3TC2-205, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 4,153 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-205ENST00000504517 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
SH3TC2-205ENST00000504517 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
SH3TC2-205ENST00000504517 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
SH3TC2-205ENST00000504517 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
SH3TC2-205ENST00000504517 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.38
SH3TC2-205ENST00000504517 ABCC9O60706 1549 aa17.28■□□□□ 0.36
SH3TC2-205ENST00000504517 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
SH3TC2-205ENST00000504517 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
SH3TC2-205ENST00000504517 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
SH3TC2-205ENST00000504517 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
SH3TC2-205ENST00000504517 NACADO15069 1562 aa16.56■□□□□ 0.24
SH3TC2-205ENST00000504517 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
SH3TC2-205ENST00000504517 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
SH3TC2-205ENST00000504517 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
SH3TC2-205ENST00000504517 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SH3TC2-205ENST00000504517 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
SH3TC2-205ENST00000504517 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
SH3TC2-205ENST00000504517 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
SH3TC2-205ENST00000504517 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
SH3TC2-205ENST00000504517 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
SH3TC2-205ENST00000504517 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
SH3TC2-205ENST00000504517 MYT1Q01538 1121 aa16.05■□□□□ 0.16
SH3TC2-205ENST00000504517 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
SH3TC2-205ENST00000504517 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
SH3TC2-205ENST00000504517 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
SH3TC2-205ENST00000504517 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
SH3TC2-205ENST00000504517 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
SH3TC2-205ENST00000504517 HRCP23327 699 aa15.89■□□□□ 0.13
SH3TC2-205ENST00000504517 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.13
SH3TC2-205ENST00000504517 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
SH3TC2-205ENST00000504517 APLP2Q06481 763 aa15.81■□□□□ 0.12
SH3TC2-205ENST00000504517 WIZO95785 1651 aa15.8■□□□□ 0.12
SH3TC2-205ENST00000504517 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
SH3TC2-205ENST00000504517 SMARCA4P51532 1647 aa15.71■□□□□ 0.1
SH3TC2-205ENST00000504517 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
SH3TC2-205ENST00000504517 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
SH3TC2-205ENST00000504517 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
SH3TC2-205ENST00000504517 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
SH3TC2-205ENST00000504517 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
SH3TC2-205ENST00000504517 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
SH3TC2-205ENST00000504517 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
SH3TC2-205ENST00000504517 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
SH3TC2-205ENST00000504517 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
SH3TC2-205ENST00000504517 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
SH3TC2-205ENST00000504517 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
SH3TC2-205ENST00000504517 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
SH3TC2-205ENST00000504517 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
SH3TC2-205ENST00000504517 SOGA1O94964 1423 aa15.36■□□□□ 0.05
SH3TC2-205ENST00000504517 EEA1Q15075 1411 aa15.36■□□□□ 0.05
SH3TC2-205ENST00000504517 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
SH3TC2-205ENST00000504517 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
SH3TC2-205ENST00000504517 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
SH3TC2-205ENST00000504517 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.03
SH3TC2-205ENST00000504517 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
SH3TC2-205ENST00000504517 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
SH3TC2-205ENST00000504517 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
SH3TC2-205ENST00000504517 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
SH3TC2-205ENST00000504517 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
SH3TC2-205ENST00000504517 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
SH3TC2-205ENST00000504517 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
SH3TC2-205ENST00000504517 FBLN2P98095 1184 aa15.2■□□□□ 0.02
SH3TC2-205ENST00000504517 ITGAEP38570 1179 aa15.2■□□□□ 0.02
SH3TC2-205ENST00000504517 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
SH3TC2-205ENST00000504517 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
SH3TC2-205ENST00000504517 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
SH3TC2-205ENST00000504517 CLIP1P30622 1438 aa15.17■□□□□ 0.02
SH3TC2-205ENST00000504517 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
SH3TC2-205ENST00000504517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
SH3TC2-205ENST00000504517 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
SH3TC2-205ENST00000504517 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
SH3TC2-205ENST00000504517 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
SH3TC2-205ENST00000504517 CUX2O14529 1486 aa15.13■□□□□ 0.01
SH3TC2-205ENST00000504517 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
SH3TC2-205ENST00000504517 CFTRP13569 1480 aa15.08■□□□□ 0.01
SH3TC2-205ENST00000504517 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
SH3TC2-205ENST00000504517 CARMIL1Q5VZK9 1371 aa15.04■□□□□ -0
SH3TC2-205ENST00000504517 ERCC6Q03468 1493 aa15.04■□□□□ -0
SH3TC2-205ENST00000504517 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
SH3TC2-205ENST00000504517 FAM50AQ14320 339 aaKnown RBP15.02□□□□□ -0.01
SH3TC2-205ENST00000504517 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
SH3TC2-205ENST00000504517 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
SH3TC2-205ENST00000504517 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
SH3TC2-205ENST00000504517 NESP48681 1621 aa14.99□□□□□ -0.01
SH3TC2-205ENST00000504517 RAPGEF2Q9Y4G8 1499 aa14.98□□□□□ -0.01
SH3TC2-205ENST00000504517 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
SH3TC2-205ENST00000504517 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
SH3TC2-205ENST00000504517 FGD5Q6ZNL6 1462 aa14.94□□□□□ -0.02
SH3TC2-205ENST00000504517 CUX1P39880 1505 aa14.9□□□□□ -0.02
SH3TC2-205ENST00000504517 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
SH3TC2-205ENST00000504517 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
SH3TC2-205ENST00000504517 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
SH3TC2-205ENST00000504517 IGF1RP08069 1367 aa14.88□□□□□ -0.03
SH3TC2-205ENST00000504517 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
SH3TC2-205ENST00000504517 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
SH3TC2-205ENST00000504517 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
SH3TC2-205ENST00000504517 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
SH3TC2-205ENST00000504517 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
SH3TC2-205ENST00000504517 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
SH3TC2-205ENST00000504517 POLA1P09884 1462 aaPredicted RBP14.75□□□□□ -0.05
SH3TC2-205ENST00000504517 KANK4Q5T7N3 995 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms