RNA–Protein interactions for RNA: ENST00000504447.1

FBXO38-207, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 1,716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-207ENST00000504447 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
FBXO38-207ENST00000504447 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
FBXO38-207ENST00000504447 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
FBXO38-207ENST00000504447 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
FBXO38-207ENST00000504447 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
FBXO38-207ENST00000504447 FOXD1Q16676 465 aa18.37■□□□□ 0.53
FBXO38-207ENST00000504447 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
FBXO38-207ENST00000504447 MSH5O43196 834 aa17.41■□□□□ 0.38
FBXO38-207ENST00000504447 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
FBXO38-207ENST00000504447 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
FBXO38-207ENST00000504447 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
FBXO38-207ENST00000504447 ADRA2BP18089 450 aa16.68■□□□□ 0.26
FBXO38-207ENST00000504447 CCDC180Q9P1Z9 1646 aa15.93■□□□□ 0.14
FBXO38-207ENST00000504447 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
FBXO38-207ENST00000504447 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
FBXO38-207ENST00000504447 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
FBXO38-207ENST00000504447 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
FBXO38-207ENST00000504447 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
FBXO38-207ENST00000504447 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
FBXO38-207ENST00000504447 ABCC9O60706 1549 aa15.35■□□□□ 0.05
FBXO38-207ENST00000504447 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
FBXO38-207ENST00000504447 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
FBXO38-207ENST00000504447 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
FBXO38-207ENST00000504447 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
FBXO38-207ENST00000504447 NACADO15069 1562 aa14.9□□□□□ -0.02
FBXO38-207ENST00000504447 HRCP23327 699 aa14.85□□□□□ -0.03
FBXO38-207ENST00000504447 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
FBXO38-207ENST00000504447 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
FBXO38-207ENST00000504447 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
FBXO38-207ENST00000504447 RNF39Q9H2S5 420 aa14.8□□□□□ -0.04
FBXO38-207ENST00000504447 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
FBXO38-207ENST00000504447 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
FBXO38-207ENST00000504447 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
FBXO38-207ENST00000504447 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
FBXO38-207ENST00000504447 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
FBXO38-207ENST00000504447 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
FBXO38-207ENST00000504447 TRIM26Q12899 539 aaPredicted RBP14.57□□□□□ -0.08
FBXO38-207ENST00000504447 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
FBXO38-207ENST00000504447 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.08
FBXO38-207ENST00000504447 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.08
FBXO38-207ENST00000504447 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
FBXO38-207ENST00000504447 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
FBXO38-207ENST00000504447 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
FBXO38-207ENST00000504447 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
FBXO38-207ENST00000504447 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
FBXO38-207ENST00000504447 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
FBXO38-207ENST00000504447 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
FBXO38-207ENST00000504447 ZEB1P37275 1124 aaPredicted RBP14.37□□□□□ -0.11
FBXO38-207ENST00000504447 WIZO95785 1651 aa14.35□□□□□ -0.11
FBXO38-207ENST00000504447 PPARGC1BQ86YN6 1023 aaKnown RBP14.33□□□□□ -0.12
FBXO38-207ENST00000504447 FAM9AQ8IZU1 332 aaPredicted RBP14.29□□□□□ -0.12
FBXO38-207ENST00000504447 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
FBXO38-207ENST00000504447 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
FBXO38-207ENST00000504447 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
FBXO38-207ENST00000504447 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
FBXO38-207ENST00000504447 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
FBXO38-207ENST00000504447 EEA1Q15075 1411 aa14.08□□□□□ -0.16
FBXO38-207ENST00000504447 WRNQ14191 1432 aaPredicted RBP eCLIP14.05□□□□□ -0.16
FBXO38-207ENST00000504447 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
FBXO38-207ENST00000504447 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
FBXO38-207ENST00000504447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.16
FBXO38-207ENST00000504447 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
FBXO38-207ENST00000504447 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
FBXO38-207ENST00000504447 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
FBXO38-207ENST00000504447 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
FBXO38-207ENST00000504447 SOGA1O94964 1423 aa13.95□□□□□ -0.18
FBXO38-207ENST00000504447 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
FBXO38-207ENST00000504447 POTEHQ6S545 545 aa13.93□□□□□ -0.18
FBXO38-207ENST00000504447 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
FBXO38-207ENST00000504447 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
FBXO38-207ENST00000504447 CCER1Q8TC90 406 aaPredicted RBP13.86□□□□□ -0.19
FBXO38-207ENST00000504447 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
FBXO38-207ENST00000504447 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
FBXO38-207ENST00000504447 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
FBXO38-207ENST00000504447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
FBXO38-207ENST00000504447 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
FBXO38-207ENST00000504447 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
FBXO38-207ENST00000504447 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
FBXO38-207ENST00000504447 KIF21BO75037 1637 aa13.79□□□□□ -0.2
FBXO38-207ENST00000504447 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
FBXO38-207ENST00000504447 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
FBXO38-207ENST00000504447 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
FBXO38-207ENST00000504447 CLIP1P30622 1438 aa13.7□□□□□ -0.22
FBXO38-207ENST00000504447 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
FBXO38-207ENST00000504447 DSG3P32926 999 aa13.68□□□□□ -0.22
FBXO38-207ENST00000504447 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
FBXO38-207ENST00000504447 VPS8Q8N3P4 1428 aa13.66□□□□□ -0.22
FBXO38-207ENST00000504447 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
FBXO38-207ENST00000504447 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
FBXO38-207ENST00000504447 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
FBXO38-207ENST00000504447 APLP2Q06481 763 aa13.61□□□□□ -0.23
FBXO38-207ENST00000504447 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
FBXO38-207ENST00000504447 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
FBXO38-207ENST00000504447 CAPN15O75808 1086 aa13.61□□□□□ -0.23
FBXO38-207ENST00000504447 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
FBXO38-207ENST00000504447 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
FBXO38-207ENST00000504447 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
FBXO38-207ENST00000504447 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
FBXO38-207ENST00000504447 ACIN1Q9UKV3 1341 aaKnown RBP13.56□□□□□ -0.24
FBXO38-207ENST00000504447 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms