RNA–Protein interactions for RNA: ENST00000502855.1

ABLIM3-204, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 2

Gene ABLIM3, Length 778 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-204ENST00000502855 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
ABLIM3-204ENST00000502855 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
ABLIM3-204ENST00000502855 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
ABLIM3-204ENST00000502855 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
ABLIM3-204ENST00000502855 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
ABLIM3-204ENST00000502855 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
ABLIM3-204ENST00000502855 FOXD1Q16676 465 aa20.8■□□□□ 0.92
ABLIM3-204ENST00000502855 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
ABLIM3-204ENST00000502855 ADRA2BP18089 450 aa20.04■□□□□ 0.8
ABLIM3-204ENST00000502855 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
ABLIM3-204ENST00000502855 ABCC9O60706 1549 aa19.18■□□□□ 0.66
ABLIM3-204ENST00000502855 MSH5O43196 834 aa19.14■□□□□ 0.65
ABLIM3-204ENST00000502855 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
ABLIM3-204ENST00000502855 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
ABLIM3-204ENST00000502855 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
ABLIM3-204ENST00000502855 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
ABLIM3-204ENST00000502855 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
ABLIM3-204ENST00000502855 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
ABLIM3-204ENST00000502855 NACADO15069 1562 aa18.16■□□□□ 0.5
ABLIM3-204ENST00000502855 KCNA4P22459 653 aa18.14■□□□□ 0.49
ABLIM3-204ENST00000502855 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
ABLIM3-204ENST00000502855 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
ABLIM3-204ENST00000502855 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
ABLIM3-204ENST00000502855 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
ABLIM3-204ENST00000502855 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABLIM3-204ENST00000502855 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
ABLIM3-204ENST00000502855 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
ABLIM3-204ENST00000502855 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
ABLIM3-204ENST00000502855 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
ABLIM3-204ENST00000502855 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
ABLIM3-204ENST00000502855 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
ABLIM3-204ENST00000502855 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
ABLIM3-204ENST00000502855 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
ABLIM3-204ENST00000502855 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
ABLIM3-204ENST00000502855 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
ABLIM3-204ENST00000502855 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
ABLIM3-204ENST00000502855 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
ABLIM3-204ENST00000502855 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
ABLIM3-204ENST00000502855 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
ABLIM3-204ENST00000502855 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
ABLIM3-204ENST00000502855 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
ABLIM3-204ENST00000502855 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
ABLIM3-204ENST00000502855 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
ABLIM3-204ENST00000502855 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
ABLIM3-204ENST00000502855 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
ABLIM3-204ENST00000502855 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
ABLIM3-204ENST00000502855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABLIM3-204ENST00000502855 ZBTB22O15209 634 aa16.69■□□□□ 0.26
ABLIM3-204ENST00000502855 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
ABLIM3-204ENST00000502855 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
ABLIM3-204ENST00000502855 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
ABLIM3-204ENST00000502855 SMARCA2P51531 1590 aa16.62■□□□□ 0.25
ABLIM3-204ENST00000502855 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
ABLIM3-204ENST00000502855 CUX2O14529 1486 aa16.61■□□□□ 0.25
ABLIM3-204ENST00000502855 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
ABLIM3-204ENST00000502855 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
ABLIM3-204ENST00000502855 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
ABLIM3-204ENST00000502855 NESP48681 1621 aa16.49■□□□□ 0.23
ABLIM3-204ENST00000502855 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
ABLIM3-204ENST00000502855 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
ABLIM3-204ENST00000502855 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
ABLIM3-204ENST00000502855 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
ABLIM3-204ENST00000502855 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
ABLIM3-204ENST00000502855 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
ABLIM3-204ENST00000502855 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
ABLIM3-204ENST00000502855 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
ABLIM3-204ENST00000502855 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
ABLIM3-204ENST00000502855 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
ABLIM3-204ENST00000502855 WIZO95785 1651 aa16.18■□□□□ 0.18
ABLIM3-204ENST00000502855 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
ABLIM3-204ENST00000502855 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
ABLIM3-204ENST00000502855 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
ABLIM3-204ENST00000502855 ATXN8OSP0DMR3 200 aa16.12■□□□□ 0.17
ABLIM3-204ENST00000502855 CFTRP13569 1480 aa16.11■□□□□ 0.17
ABLIM3-204ENST00000502855 WDR62O43379 1518 aa16.11■□□□□ 0.17
ABLIM3-204ENST00000502855 APLP2Q06481 763 aa16.07■□□□□ 0.16
ABLIM3-204ENST00000502855 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
ABLIM3-204ENST00000502855 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
ABLIM3-204ENST00000502855 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ABLIM3-204ENST00000502855 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
ABLIM3-204ENST00000502855 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
ABLIM3-204ENST00000502855 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
ABLIM3-204ENST00000502855 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
ABLIM3-204ENST00000502855 CAPN15O75808 1086 aa15.9■□□□□ 0.14
ABLIM3-204ENST00000502855 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
ABLIM3-204ENST00000502855 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
ABLIM3-204ENST00000502855 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
ABLIM3-204ENST00000502855 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
ABLIM3-204ENST00000502855 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
ABLIM3-204ENST00000502855 IFT140Q96RY7 1462 aa15.77■□□□□ 0.11
ABLIM3-204ENST00000502855 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
ABLIM3-204ENST00000502855 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
ABLIM3-204ENST00000502855 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
ABLIM3-204ENST00000502855 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
ABLIM3-204ENST00000502855 DSG3P32926 999 aa15.65■□□□□ 0.1
ABLIM3-204ENST00000502855 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
ABLIM3-204ENST00000502855 POLA2Q14181 598 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms