RNA–Protein interactions for RNA: ENST00000498428.5

ROBO1-211, Transcript of roundabout guidance receptor 1, humanhuman

TSL 2

Gene ROBO1, Length 3,566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROBO1-211ENST00000498428 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
ROBO1-211ENST00000498428 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
ROBO1-211ENST00000498428 ABCC9O60706 1549 aa12.98□□□□□ -0.33
ROBO1-211ENST00000498428 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
ROBO1-211ENST00000498428 CCDC180Q9P1Z9 1646 aa12.78□□□□□ -0.36
ROBO1-211ENST00000498428 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
ROBO1-211ENST00000498428 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
ROBO1-211ENST00000498428 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.41
ROBO1-211ENST00000498428 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
ROBO1-211ENST00000498428 SCRIBQ14160 1630 aa12.27□□□□□ -0.45
ROBO1-211ENST00000498428 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
ROBO1-211ENST00000498428 NACADO15069 1562 aa12.15□□□□□ -0.46
ROBO1-211ENST00000498428 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
ROBO1-211ENST00000498428 MYT1Q01538 1121 aa12.05□□□□□ -0.48
ROBO1-211ENST00000498428 HRCP23327 699 aa11.98□□□□□ -0.49
ROBO1-211ENST00000498428 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
ROBO1-211ENST00000498428 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
ROBO1-211ENST00000498428 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
ROBO1-211ENST00000498428 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
ROBO1-211ENST00000498428 PPARGC1BQ86YN6 1023 aaKnown RBP11.79□□□□□ -0.52
ROBO1-211ENST00000498428 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.52
ROBO1-211ENST00000498428 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
ROBO1-211ENST00000498428 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
ROBO1-211ENST00000498428 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
ROBO1-211ENST00000498428 BICRAQ9NZM4 1560 aa11.66□□□□□ -0.54
ROBO1-211ENST00000498428 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
ROBO1-211ENST00000498428 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
ROBO1-211ENST00000498428 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
ROBO1-211ENST00000498428 BAZ1AQ9NRL2 1556 aaPredicted RBP11.59□□□□□ -0.55
ROBO1-211ENST00000498428 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
ROBO1-211ENST00000498428 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
ROBO1-211ENST00000498428 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
ROBO1-211ENST00000498428 WIZO95785 1651 aa11.53□□□□□ -0.56
ROBO1-211ENST00000498428 ERICH6Q7L0X2 663 aa11.53□□□□□ -0.56
ROBO1-211ENST00000498428 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
ROBO1-211ENST00000498428 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
ROBO1-211ENST00000498428 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
ROBO1-211ENST00000498428 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
ROBO1-211ENST00000498428 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
ROBO1-211ENST00000498428 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
ROBO1-211ENST00000498428 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.58
ROBO1-211ENST00000498428 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
ROBO1-211ENST00000498428 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
ROBO1-211ENST00000498428 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
ROBO1-211ENST00000498428 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
ROBO1-211ENST00000498428 LOC105371045A0A1W2PR82 267 aa11.29□□□□□ -0.6
ROBO1-211ENST00000498428 BCL11AQ9H165 835 aa11.28□□□□□ -0.6
ROBO1-211ENST00000498428 UBTFP17480 764 aaKnown RBP11.25□□□□□ -0.61
ROBO1-211ENST00000498428 NESP48681 1621 aa11.23□□□□□ -0.61
ROBO1-211ENST00000498428 APLP2Q06481 763 aa11.23□□□□□ -0.61
ROBO1-211ENST00000498428 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
ROBO1-211ENST00000498428 CADPSQ9ULU8 1353 aa11.2□□□□□ -0.62
ROBO1-211ENST00000498428 FBLN2P98095 1184 aa11.2□□□□□ -0.62
ROBO1-211ENST00000498428 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
ROBO1-211ENST00000498428 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
ROBO1-211ENST00000498428 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
ROBO1-211ENST00000498428 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
ROBO1-211ENST00000498428 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.63
ROBO1-211ENST00000498428 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
ROBO1-211ENST00000498428 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
ROBO1-211ENST00000498428 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
ROBO1-211ENST00000498428 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
ROBO1-211ENST00000498428 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
ROBO1-211ENST00000498428 FANCD2Q9BXW9 1451 aa11.09□□□□□ -0.63
ROBO1-211ENST00000498428 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
ROBO1-211ENST00000498428 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
ROBO1-211ENST00000498428 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
ROBO1-211ENST00000498428 CFTRP13569 1480 aa11.04□□□□□ -0.64
ROBO1-211ENST00000498428 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
ROBO1-211ENST00000498428 SOGA1O94964 1423 aa11.03□□□□□ -0.64
ROBO1-211ENST00000498428 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.64
ROBO1-211ENST00000498428 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
ROBO1-211ENST00000498428 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
ROBO1-211ENST00000498428 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
ROBO1-211ENST00000498428 CUX2O14529 1486 aa10.96□□□□□ -0.65
ROBO1-211ENST00000498428 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.66
ROBO1-211ENST00000498428 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
ROBO1-211ENST00000498428 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
ROBO1-211ENST00000498428 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
ROBO1-211ENST00000498428 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
ROBO1-211ENST00000498428 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
ROBO1-211ENST00000498428 KIF27Q86VH2 1401 aa10.9□□□□□ -0.66
ROBO1-211ENST00000498428 SYNJ1O43426 1573 aa10.9□□□□□ -0.67
ROBO1-211ENST00000498428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.67
ROBO1-211ENST00000498428 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.67
ROBO1-211ENST00000498428 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
ROBO1-211ENST00000498428 CUX1P39880 1505 aa10.88□□□□□ -0.67
ROBO1-211ENST00000498428 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.677e-7■■■■■ 27.6
ROBO1-211ENST00000498428 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
ROBO1-211ENST00000498428 ANP32EQ9BTT0 268 aa10.85□□□□□ -0.67
ROBO1-211ENST00000498428 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
ROBO1-211ENST00000498428 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
ROBO1-211ENST00000498428 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
ROBO1-211ENST00000498428 CARMIL1Q5VZK9 1371 aa10.82□□□□□ -0.68
ROBO1-211ENST00000498428 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
ROBO1-211ENST00000498428 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
ROBO1-211ENST00000498428 DNMBPQ6XZF7 1577 aa10.76□□□□□ -0.69
ROBO1-211ENST00000498428 GAPVD1Q14C86 1478 aa10.76□□□□□ -0.69
ROBO1-211ENST00000498428 IGF1RP08069 1367 aa10.75□□□□□ -0.69
ROBO1-211ENST00000498428 TOP2BQ02880 1626 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms