RNA–Protein interactions for RNA: ENST00000497923.5

PTGFR-204, Transcript of prostaglandin F receptor, humanhuman

TSL 3

Gene PTGFR, Length 1,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFR-204ENST00000497923 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
PTGFR-204ENST00000497923 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
PTGFR-204ENST00000497923 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
PTGFR-204ENST00000497923 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
PTGFR-204ENST00000497923 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
PTGFR-204ENST00000497923 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
PTGFR-204ENST00000497923 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
PTGFR-204ENST00000497923 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
PTGFR-204ENST00000497923 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
PTGFR-204ENST00000497923 ABCC9O60706 1549 aa25.92■■□□□ 1.74
PTGFR-204ENST00000497923 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
PTGFR-204ENST00000497923 NACADO15069 1562 aa25.6■■□□□ 1.69
PTGFR-204ENST00000497923 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
PTGFR-204ENST00000497923 HRCP23327 699 aa25.55■■□□□ 1.68
PTGFR-204ENST00000497923 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
PTGFR-204ENST00000497923 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
PTGFR-204ENST00000497923 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
PTGFR-204ENST00000497923 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
PTGFR-204ENST00000497923 TRIM26Q12899 539 aaPredicted RBP25.08■■□□□ 1.61
PTGFR-204ENST00000497923 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
PTGFR-204ENST00000497923 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
PTGFR-204ENST00000497923 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
PTGFR-204ENST00000497923 WIZO95785 1651 aa24.89■■□□□ 1.58
PTGFR-204ENST00000497923 ZEB1P37275 1124 aaPredicted RBP24.77■■□□□ 1.56
PTGFR-204ENST00000497923 EIF4G1Q04637 1599 aaKnown RBP24.75■■□□□ 1.55
PTGFR-204ENST00000497923 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
PTGFR-204ENST00000497923 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
PTGFR-204ENST00000497923 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
PTGFR-204ENST00000497923 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
PTGFR-204ENST00000497923 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
PTGFR-204ENST00000497923 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
PTGFR-204ENST00000497923 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
PTGFR-204ENST00000497923 EEA1Q15075 1411 aa24.39■■□□□ 1.49
PTGFR-204ENST00000497923 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
PTGFR-204ENST00000497923 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
PTGFR-204ENST00000497923 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
PTGFR-204ENST00000497923 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
PTGFR-204ENST00000497923 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
PTGFR-204ENST00000497923 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
PTGFR-204ENST00000497923 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
PTGFR-204ENST00000497923 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
PTGFR-204ENST00000497923 SOGA1O94964 1423 aa24.06■■□□□ 1.44
PTGFR-204ENST00000497923 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
PTGFR-204ENST00000497923 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
PTGFR-204ENST00000497923 KIF21BO75037 1637 aa23.96■■□□□ 1.43
PTGFR-204ENST00000497923 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
PTGFR-204ENST00000497923 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
PTGFR-204ENST00000497923 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
PTGFR-204ENST00000497923 CCER1Q8TC90 406 aaPredicted RBP23.88■■□□□ 1.41
PTGFR-204ENST00000497923 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
PTGFR-204ENST00000497923 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
PTGFR-204ENST00000497923 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
PTGFR-204ENST00000497923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
PTGFR-204ENST00000497923 TOP2BQ02880 1626 aa23.72■■□□□ 1.39
PTGFR-204ENST00000497923 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
PTGFR-204ENST00000497923 CLIP1P30622 1438 aa23.68■■□□□ 1.38
PTGFR-204ENST00000497923 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
PTGFR-204ENST00000497923 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
PTGFR-204ENST00000497923 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
PTGFR-204ENST00000497923 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
PTGFR-204ENST00000497923 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
PTGFR-204ENST00000497923 APLP2Q06481 763 aa23.51■■□□□ 1.35
PTGFR-204ENST00000497923 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
PTGFR-204ENST00000497923 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
PTGFR-204ENST00000497923 PRXQ9BXM0 1461 aa23.46■■□□□ 1.35
PTGFR-204ENST00000497923 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
PTGFR-204ENST00000497923 CFTRP13569 1480 aa23.39■■□□□ 1.33
PTGFR-204ENST00000497923 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.33
PTGFR-204ENST00000497923 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
PTGFR-204ENST00000497923 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
PTGFR-204ENST00000497923 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
PTGFR-204ENST00000497923 CUX1P39880 1505 aa23.36■■□□□ 1.33
PTGFR-204ENST00000497923 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
PTGFR-204ENST00000497923 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
PTGFR-204ENST00000497923 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
PTGFR-204ENST00000497923 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
PTGFR-204ENST00000497923 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
PTGFR-204ENST00000497923 RRBP1Q9P2E9 1410 aaKnown RBP23.14■■□□□ 1.29
PTGFR-204ENST00000497923 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
PTGFR-204ENST00000497923 MAP3K1Q13233 1512 aa23.09■■□□□ 1.29
PTGFR-204ENST00000497923 CUX2O14529 1486 aa23.08■■□□□ 1.28
PTGFR-204ENST00000497923 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
PTGFR-204ENST00000497923 ARHGAP35Q9NRY4 1499 aa23.07■■□□□ 1.28
PTGFR-204ENST00000497923 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
PTGFR-204ENST00000497923 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
PTGFR-204ENST00000497923 IGF1RP08069 1367 aa22.99■■□□□ 1.27
PTGFR-204ENST00000497923 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
PTGFR-204ENST00000497923 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
PTGFR-204ENST00000497923 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
PTGFR-204ENST00000497923 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
PTGFR-204ENST00000497923 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
PTGFR-204ENST00000497923 TIAM1Q13009 1591 aa22.92■■□□□ 1.26
PTGFR-204ENST00000497923 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
PTGFR-204ENST00000497923 MIER1Q8N108 512 aa22.84■■□□□ 1.25
PTGFR-204ENST00000497923 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
PTGFR-204ENST00000497923 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
PTGFR-204ENST00000497923 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
PTGFR-204ENST00000497923 CFAP43Q8NDM7 1665 aa22.81■■□□□ 1.24
PTGFR-204ENST00000497923 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
PTGFR-204ENST00000497923 LRRC9Q6ZRR7 1453 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 295 ms