RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, humanhuman

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-213ENST00000495426 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
BBS9-213ENST00000495426 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
BBS9-213ENST00000495426 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
BBS9-213ENST00000495426 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
BBS9-213ENST00000495426 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
BBS9-213ENST00000495426 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
BBS9-213ENST00000495426 FOXD1Q16676 465 aa17.47■□□□□ 0.39
BBS9-213ENST00000495426 ADRA2BP18089 450 aa17.1■□□□□ 0.33
BBS9-213ENST00000495426 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
BBS9-213ENST00000495426 ABCC9O60706 1549 aa16.86■□□□□ 0.29
BBS9-213ENST00000495426 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
BBS9-213ENST00000495426 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
BBS9-213ENST00000495426 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
BBS9-213ENST00000495426 MSH5O43196 834 aa15.99■□□□□ 0.15
BBS9-213ENST00000495426 KCNA4P22459 653 aa15.99■□□□□ 0.15
BBS9-213ENST00000495426 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
BBS9-213ENST00000495426 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
BBS9-213ENST00000495426 NACADO15069 1562 aa15.8■□□□□ 0.12
BBS9-213ENST00000495426 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
BBS9-213ENST00000495426 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
BBS9-213ENST00000495426 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
BBS9-213ENST00000495426 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
BBS9-213ENST00000495426 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
BBS9-213ENST00000495426 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
BBS9-213ENST00000495426 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
BBS9-213ENST00000495426 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
BBS9-213ENST00000495426 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
BBS9-213ENST00000495426 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
BBS9-213ENST00000495426 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
BBS9-213ENST00000495426 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
BBS9-213ENST00000495426 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
BBS9-213ENST00000495426 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
BBS9-213ENST00000495426 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
BBS9-213ENST00000495426 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
BBS9-213ENST00000495426 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
BBS9-213ENST00000495426 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
BBS9-213ENST00000495426 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
BBS9-213ENST00000495426 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
BBS9-213ENST00000495426 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
BBS9-213ENST00000495426 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
BBS9-213ENST00000495426 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
BBS9-213ENST00000495426 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
BBS9-213ENST00000495426 ZBTB22O15209 634 aa14.69□□□□□ -0.06
BBS9-213ENST00000495426 CUX2O14529 1486 aa14.64□□□□□ -0.07
BBS9-213ENST00000495426 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
BBS9-213ENST00000495426 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
BBS9-213ENST00000495426 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
BBS9-213ENST00000495426 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
BBS9-213ENST00000495426 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
BBS9-213ENST00000495426 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
BBS9-213ENST00000495426 ATAD2BQ9ULI0 1458 aa14.49□□□□□ -0.09
BBS9-213ENST00000495426 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
BBS9-213ENST00000495426 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
BBS9-213ENST00000495426 NESP48681 1621 aa14.43□□□□□ -0.1
BBS9-213ENST00000495426 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
BBS9-213ENST00000495426 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
BBS9-213ENST00000495426 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
BBS9-213ENST00000495426 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
BBS9-213ENST00000495426 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
BBS9-213ENST00000495426 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
BBS9-213ENST00000495426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
BBS9-213ENST00000495426 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
BBS9-213ENST00000495426 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
BBS9-213ENST00000495426 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
BBS9-213ENST00000495426 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
BBS9-213ENST00000495426 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
BBS9-213ENST00000495426 WDR62O43379 1518 aa14.11□□□□□ -0.15
BBS9-213ENST00000495426 WIZO95785 1651 aa14.07□□□□□ -0.16
BBS9-213ENST00000495426 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
BBS9-213ENST00000495426 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
BBS9-213ENST00000495426 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
BBS9-213ENST00000495426 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
BBS9-213ENST00000495426 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.16
BBS9-213ENST00000495426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
BBS9-213ENST00000495426 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
BBS9-213ENST00000495426 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
BBS9-213ENST00000495426 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
BBS9-213ENST00000495426 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
BBS9-213ENST00000495426 CFTRP13569 1480 aa13.89□□□□□ -0.19
BBS9-213ENST00000495426 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
BBS9-213ENST00000495426 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
BBS9-213ENST00000495426 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
BBS9-213ENST00000495426 RIMBP3CA6NJZ7 1639 aa13.83□□□□□ -0.2
BBS9-213ENST00000495426 RIMBP3BA6NNM3 1639 aa13.83□□□□□ -0.2
BBS9-213ENST00000495426 RIMBP3Q9UFD9 1639 aa13.83□□□□□ -0.2
BBS9-213ENST00000495426 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
BBS9-213ENST00000495426 APLP2Q06481 763 aa13.78□□□□□ -0.2
BBS9-213ENST00000495426 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
BBS9-213ENST00000495426 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
BBS9-213ENST00000495426 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
BBS9-213ENST00000495426 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
BBS9-213ENST00000495426 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
BBS9-213ENST00000495426 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
BBS9-213ENST00000495426 CHD1O14646 1710 aa13.71□□□□□ -0.21
BBS9-213ENST00000495426 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
BBS9-213ENST00000495426 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
BBS9-213ENST00000495426 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
BBS9-213ENST00000495426 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
BBS9-213ENST00000495426 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
BBS9-213ENST00000495426 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms